RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 EMC3Q9P0I2 261 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 LIPGQ9Y5X9 500 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 C5orf51A6NDU8 294 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 DHRS3O75911 302 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 KNG1P01042 644 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 HLA-AP01891 365 aaKnown RBP8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 C1QBP02746 253 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 MGMTP16455 207 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 OPRM1P35372 400 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 NPY4RP50391 375 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 P2RX3P56373 397 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 SOX8P57073 446 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 RIPPLY1Q0D2K3 151 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 FOXO1Q12778 655 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 UNC119Q13432 240 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 Q5BKY6 102 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 FOXRED2Q8IWF2 684 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 OR10R2Q8NGX6 335 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 OR4K15Q8NH41 348 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 RNF138Q8WVD3 245 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 ELMOD3Q96FG2 381 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 ZNF703Q9H7S9 590 aaPredicted RBP8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 PARPBPQ9NWS1 579 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 SLC7A11Q9UPY5 501 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 DMXL1Q9Y485 3027 aa8.48□□□□□ -1.05
CACNA1A-248ENST00000637774 TRGV5A0A0B4J1U4 118 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 EEF1E1-BLOC1S5C9J1V9 151 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 H3BUI4 141 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 RAB27BO00194 218 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 RGS13O14921 159 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 GLI4P10075 376 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 IGFBP3P17936 291 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 MRPS34P82930 218 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 UBE2V2Q15819 145 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 FAM27BQ5VT28 67 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CD276Q5ZPR3 534 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 MRPL21Q7Z2W9 205 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CPT1CQ8TCG5 803 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 SGK3Q96BR1 496 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CCDC120Q96HB5 630 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 SF3B5Q9BWJ5 86 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 RANBP3Q9H6Z4 567 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 LOC102725191A0A1B0GVB3 256 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 TSPAN9O75954 239 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 NDUFB6O95139 128 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 ZNF35P13682 527 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 PTGFRP43088 359 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 RRADP55042 308 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 PCBD1P61457 104 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 RAB1AP62820 205 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 JMJD6Q6NYC1 403 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 OR5AS1Q8N127 324 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 TMEM178AQ8NBL3 297 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 FDCSPQ8NFU4 85 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 INTS12Q96CB8 462 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 ZNF436Q9C0F3 470 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CA10Q9NS85 328 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 KLK13Q9UKR3 277 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 IGF2RP11717 2491 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 PKDREJQ9NTG1 2253 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 ZNF716A6NP11 495 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 SRSF10O75494 262 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 OR7C1O76099 320 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 FSTP19883 344 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 DUSP1P28562 367 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 TSC22D1Q15714 1073 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 BEX5Q5H9J7 111 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 C3P1Q6ZMU1 363 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 C6orf201Q7Z4U5 140 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 GLRX5Q86SX6 157 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 OR52H1Q8NGJ2 320 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 OR14K1Q8NGZ2 314 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CCDC107Q8WV48 283 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 SLC25A28Q96A46 364 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 WDR89Q96FK6 387 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 HIST1H2AAQ96QV6 131 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 DHRS9Q9BPW9 319 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 CHMP1AQ9HD42 196 aaPredicted RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 PNRC2Q9NPJ4 139 aaKnown RBP8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 SPEF1Q9Y4P9 236 aa8.47□□□□□ -1.05
CACNA1A-248ENST00000637774 IGKV1-9A0A0C4DH69 117 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 ZNF850A8MQ14 1090 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 L7N2F9 121 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 BPNT1O95861 308 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 NRASP01111 189 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 CTRB1P17538 263 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 ACKR3P25106 362 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 IL13RA1P78552 427 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 ECH1Q13011 328 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 HLXQ14774 488 aaPredicted RBP8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 CHRFAM7AQ494W8 412 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 HIKESHIQ53FT3 197 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 CTRB2Q6GPI1 263 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 SLC51BQ86UW2 128 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 TMEM17Q86X19 198 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 TCTE3Q8IZS6 198 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 MUC20Q8N307 709 aaPredicted RBP8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 LINC00469Q8N7U9 141 aa8.46□□□□□ -1.05
CACNA1A-248ENST00000637774 OR5H2Q8NGV7 314 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms