RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 RNF148Q8N7C7 305 aa13.4□□□□□ -0.26
CLN3-255ENST00000637100 ABHD6Q9BV23 337 aa13.4□□□□□ -0.26
CLN3-255ENST00000637100 FGF23Q9GZV9 251 aaPredicted RBP13.4□□□□□ -0.26
CLN3-255ENST00000637100 WDR13Q9H1Z4 485 aa13.4□□□□□ -0.26
CLN3-255ENST00000637100 RGCCQ9H4X1 137 aa13.4□□□□□ -0.26
CLN3-255ENST00000637100 RANBP3Q9H6Z4 567 aaPredicted RBP13.4□□□□□ -0.26
CLN3-255ENST00000637100 BAIAP2Q9UQB8 552 aa13.4□□□□□ -0.26
CLN3-255ENST00000637100 TET2Q6N021 2002 aaPredicted RBP13.4□□□□□ -0.26
CLN3-255ENST00000637100 PLXNB1O43157 2135 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 MEIOCA2RUB1 952 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 TMEM210A6NLX4 147 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 GASTP01350 101 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 GABRA5P31644 462 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 OPRL1P41146 370 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 DLX1P56177 255 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 TAF13Q15543 124 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 OR5T2Q8NGG2 359 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 OR5P3Q8WZ94 311 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 ITFG2Q969R8 447 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 MCUR1Q96AQ8 359 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 ABCB9Q9NP78 766 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 DNAH3Q8TD57 4116 aa13.39□□□□□ -0.27
CLN3-255ENST00000637100 RYR3Q15413 4870 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 GYPBP06028 91 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 CLUP10909 449 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 ACKR3P25106 362 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 ZNF121P58317 390 aaPredicted RBP13.38□□□□□ -0.27
CLN3-255ENST00000637100 PRB3Q04118 309 aaPredicted RBP13.38□□□□□ -0.27
CLN3-255ENST00000637100 IKZF1Q13422 519 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 TIGD6Q17RP2 521 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 SPATS1Q496A3 300 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 PNKDQ8N490 385 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 OR9Q2Q8NGE9 314 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 OR4Q3Q8NH05 313 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 MICU1Q9BPX6 476 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 PPA2Q9H2U2 334 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 SLC25A10Q9UBX3 287 aaPredicted RBP13.38□□□□□ -0.27
CLN3-255ENST00000637100 ZNF222Q9UK12 451 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 V9GYQ6 96 aa13.38□□□□□ -0.27
CLN3-255ENST00000637100 TRBV23-1A0A0A0MS06 115 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 ARPC2O15144 300 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 TBX1O43435 398 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 CD300LDQ6UXZ3 194 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 Q6ZTK2 550 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 FAM57BQ71RH2 274 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 TIGD4Q8IY51 512 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 FTMTQ8N4E7 242 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 C11orf42Q8N5U0 333 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 OR5D13Q8NGL4 314 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
CLN3-255ENST00000637100 C17orf50Q8WW18 174 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 HPSE2Q8WWQ2 592 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 AMELYQ99218 206 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 RTL8AQ9BWD3 113 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 PAPOLGQ9BWT3 736 aaKnown RBP13.37□□□□□ -0.27
CLN3-255ENST00000637100 TSSK6Q9BXA6 273 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 DGCR6LQ9BY27 220 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 FAM234AQ9H0X4 552 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 CMC2Q9NRP2 79 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 SIGLEC9Q9Y336 463 aa13.37□□□□□ -0.27
CLN3-255ENST00000637100 SF3B6Q9Y3B4 125 aaKnown RBP13.37□□□□□ -0.27
CLN3-255ENST00000637100 IGKV1D-17A0A075B6S4 117 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 ANKRD61A6NGH8 418 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 ANXA2P2A6NMY6 339 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 H3BUX3 64 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 PAHP00439 452 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 ANXA2P07355 339 aaKnown RBP13.36□□□□□ -0.27
CLN3-255ENST00000637100 GNALP38405 381 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 EIF2B1Q14232 305 aaKnown RBP13.36□□□□□ -0.27
CLN3-255ENST00000637100 SAMD4BQ5PRF9 694 aaKnown RBP13.36□□□□□ -0.27
CLN3-255ENST00000637100 SHFQ7M4L6 423 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 PGAM4Q8N0Y7 254 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 Q8N2B8 174 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 DTX3Q8N9I9 347 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 OR2T33Q8NG76 320 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 RPL3LQ92901 407 aaKnown RBP13.36□□□□□ -0.27
CLN3-255ENST00000637100 DUS3LQ96G46 650 aaKnown RBP13.36□□□□□ -0.27
CLN3-255ENST00000637100 SDSLQ96GA7 329 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 SSX3Q99909 188 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 NLKQ9UBE8 527 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 ZNF391Q9UJN7 358 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 N6AMT1Q9Y5N5 214 aa13.36□□□□□ -0.27
CLN3-255ENST00000637100 A0A1W2PRD5 423 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 A0A1W2PRF3 423 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 A0A1W2PRM7 423 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 OR2AT4A6NND4 320 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 TNFRSF11BO00300 401 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 AKR7A2O43488 359 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 HSD11B1P28845 292 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 MSX2P35548 267 aaPredicted RBP13.35□□□□□ -0.27
CLN3-255ENST00000637100 PRDX4Q13162 271 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 LIAT1Q6ZQX7 453 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 OR5K1Q8NHB7 308 aa13.35□□□□□ -0.27
CLN3-255ENST00000637100 H1FXQ92522 213 aaKnown RBP13.35□□□□□ -0.27
CLN3-255ENST00000637100 LYZL4Q96KX0 146 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms