RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ABCA2Q9BZC7 2435 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 RGPD8O14715 1765 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 A0A1B0GX78 115 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM30CPA0ZSE6 113 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 HSPB2A8KAH6 182 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 LDB3O75112 727 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 GGT5P36269 586 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SSBP1Q04837 148 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 IHHQ14623 411 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 HSPB2Q16082 182 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 FAHD2BQ6P2I3 314 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF841Q6ZN19 808 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 H1FNTQ75WM6 255 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PNPLA1Q8N8W4 532 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 OR2T10Q8NGZ9 312 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 DERL3Q96Q80 235 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 CYSLTR2Q9NS75 346 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 CACNG5Q9UF02 275 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ZFP30Q9Y2G7 519 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RIF1Q5UIP0 2472 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PRKRAO75569 313 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ADRB1P08588 477 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SLC35E2P0CK97 266 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PIGFQ07326 219 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SRSF5Q13243 272 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SFT2D3Q587I9 215 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SLC25A30Q5SVS4 291 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM182Q6ZP80 229 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 KLRG1Q96E93 195 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 OPALINQ96PE5 141 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 APOOQ9BUR5 198 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 UBE2L5PA0A1B0GUS4 154 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 A0A1W2PS18 150 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 GALR1P47211 349 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 NUTF2P61970 127 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PDZK1IP1Q13113 114 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 DNAJC5GQ8N7S2 189 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 C19orf43Q9BQ61 176 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SH2D2AQ9NP31 389 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM140Q9NV12 185 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ADAMTS5Q9UNA0 930 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PIK3C2BO00750 1634 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 USF3Q68DE3 2245 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ACOT7LQ6ZUV0 252 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 STPG3Q8N7X2 389 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 DDB2Q92466 427 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 FAM3DQ96BQ1 224 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SNRNP40Q96DI7 357 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 GEMIN7Q9H840 131 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PRDM7Q9NQW5 492 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 EML6Q6ZMW3 1958 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SDCBPO00560 298 aaPredicted RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 FPR3P25089 353 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 WDR5P61964 334 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SERF2P84101 59 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RNPS1Q15287 305 aaKnown RBP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 GSG1Q2KHT4 349 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PLPPR5Q32ZL2 321 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 CCDC144NLQ6NUI1 221 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 NHLRC1Q6VVB1 395 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 STXBP6Q8NFX7 210 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 EBF4Q9BQW3 602 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 JKAMPQ9P055 326 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF391Q9UJN7 358 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 A0A1B0GV72 72 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RBFOX2O43251 390 aaKnown RBP eCLIP5.47□□□□□ -1.53
SCN1A-212ENST00000636194 PVRP15151 417 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RAB38P57729 211 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SH3BP2P78314 561 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SOWAHAQ2M3V2 549 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 NCBP2-AS2Q69YL0 99 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 NETO1Q8TDF5 533 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 C12orf57Q99622 126 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 MMP28Q9H239 520 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 MANBALQ9NQG1 85 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 LPAR3Q9UBY5 353 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 RCE1Q9Y256 329 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 MYOM1P52179 1685 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 OTOGLQ3ZCN5 2332 aa5.47□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM233B4DJY2 109 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM262E9PQX1 116 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 S1PR2O95136 353 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 UTS2O95399 124 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 PIPP12273 146 aaPredicted RBP5.46□□□□□ -1.53
SCN1A-212ENST00000636194 CD99P14209 185 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 CR2P20023 1033 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 OR4D1Q15615 310 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 HLA-BQ31612 363 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 GCSAMLQ5JQS6 135 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM64Q6YI46 380 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 FUNDC1Q8IVP5 155 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM70Q9BUB7 260 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 VSIG4Q9Y279 399 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 NUMBLQ9Y6R0 609 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 PEAK1Q9H792 1746 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 FCN1O00602 326 aa5.46□□□□□ -1.53
SCN1A-212ENST00000636194 LALBAP00709 142 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms