RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 IER3IP1Q9Y5U9 82 aa14.5□□□□□ -0.09
CLN6-212ENST00000636020 A0A087WUU8 490 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 PTP4A3O75365 173 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 OTX1P32242 354 aaPredicted RBP14.49□□□□□ -0.09
CLN6-212ENST00000636020 IFNA8P32881 189 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 SLC25A1P53007 311 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 ERVFRD-1P60508 538 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 SSX2Q16385 188 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 SLC36A3Q495N2 470 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 TBPL2Q6SJ96 375 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 CYB561A3Q8NBI2 242 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 ZNRF1Q8ND25 227 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 OR51D1Q8NGF3 324 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 PRR25Q96S07 402 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 GPX7Q96SL4 187 aaPredicted RBP14.49□□□□□ -0.09
CLN6-212ENST00000636020 OPA3Q9H6K4 179 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 SRA1Q9HD15 236 aaKnown RBP14.49□□□□□ -0.09
CLN6-212ENST00000636020 NKIRAS1Q9NYS0 192 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 RHCGQ9UBD6 479 aa14.49□□□□□ -0.09
CLN6-212ENST00000636020 NDUFB2O95178 105 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 TXNDC12O95881 172 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 TRAM2Q15035 370 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 ZFAND6Q6FIF0 208 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 DRAM2Q6UX65 266 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 MBOAT2Q6ZWT7 520 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 OFCC1Q8IZS5 231 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 OR52H1Q8NGJ2 320 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 SPSB4Q96A44 273 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 ZNF649Q9BS31 505 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 INTS9Q9NV88 658 aaKnown RBP14.48□□□□□ -0.09
CLN6-212ENST00000636020 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.48□□□□□ -0.09
CLN6-212ENST00000636020 TBL2Q9Y4P3 447 aaKnown RBP14.48□□□□□ -0.09
CLN6-212ENST00000636020 LRP12Q9Y561 859 aa14.48□□□□□ -0.09
CLN6-212ENST00000636020 IGKV1D-17A0A075B6S4 117 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 OR2AT4A6NND4 320 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 YAP1P46937 504 aaKnown RBP14.47□□□□□ -0.09
CLN6-212ENST00000636020 GABRA2P47869 451 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 TMEM200BQ69YZ2 307 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 ZNF730Q6ZMV8 503 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 PIGWQ7Z7B1 504 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 TMEM185AQ8NFB2 350 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 FNDC11Q9BVV2 318 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 NLKQ9UBE8 527 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 SIGLEC7Q9Y286 467 aa14.47□□□□□ -0.09
CLN6-212ENST00000636020 ODF3BA8MYP8 253 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 FFAR1O14842 300 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 AKR7A2O43488 359 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 IFNA14P01570 189 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 JUNBP17275 347 aaPredicted RBP14.46□□□□□ -0.09
CLN6-212ENST00000636020 IDH3AP50213 366 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 CYBRD1Q53TN4 286 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 ADAMTSL5Q6ZMM2 481 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 RPL3LQ92901 407 aaKnown RBP14.46□□□□□ -0.09
CLN6-212ENST00000636020 EBF4Q9BQW3 602 aa14.46□□□□□ -0.09
CLN6-212ENST00000636020 hCG_1809904A0A1W2PP81 198 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 A0A1W2PPE2 198 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 A0A1W2PPH5 198 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 A0A1W2PR64 198 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 A0A1W2PRV1 198 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 FAM90A22PA8MWA6 464 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 J3KTA2 159 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 XRCC2O43543 280 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 ARG1P05089 322 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 SLC2A1P11166 492 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 PSG2P11465 335 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 AZGP1P25311 298 aaKnown RBP14.45□□□□□ -0.1
CLN6-212ENST00000636020 MYCNOSP40205 109 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 CEBPDP49716 269 aaPredicted RBP14.45□□□□□ -0.1
CLN6-212ENST00000636020 FAM3AP98173 230 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 ZNF782Q6ZMW2 699 aaPredicted RBP14.45□□□□□ -0.1
CLN6-212ENST00000636020 DPY19L2P2Q6ZN68 376 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 SLC16A9Q7RTY1 509 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 CPLX4Q7Z7G2 160 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 LZICQ8WZA0 190 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 LYZL4Q96KX0 146 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 P2RX4Q99571 388 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 CCDC28BQ9BUN5 200 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 CCDC134Q9H6E4 229 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 USE1Q9NZ43 259 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 ZNF222Q9UK12 451 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 SNX13Q9Y5W8 968 aa14.45□□□□□ -0.1
CLN6-212ENST00000636020 LPLP06858 475 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 CCL3L1P16619 93 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 NOS3P29474 1203 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 GNALP38405 381 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 RPS6KA3P51812 740 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 FXYD6P3P58550 94 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 RPL31P62899 125 aaKnown RBP14.44□□□□□ -0.1
CLN6-212ENST00000636020 KCTD18Q6PI47 426 aaPredicted RBP14.44□□□□□ -0.1
CLN6-212ENST00000636020 ZBTB46Q86UZ6 589 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 SBSPONQ8IVN8 264 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 SDSLQ96GA7 329 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 TPD52L3Q96J77 140 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 MICU1Q9BPX6 476 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 MRPL22Q9NWU5 206 aaKnown RBP14.44□□□□□ -0.1
CLN6-212ENST00000636020 RHBDD3Q9Y3P4 386 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 N6AMT1Q9Y5N5 214 aa14.44□□□□□ -0.1
CLN6-212ENST00000636020 TROVE2P10155 538 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLN6-212ENST00000636020 PRKXP51817 358 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms