RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 SLC25A14O95258 325 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 WISP3O95389 354 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GUCA1CO95843 209 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GAPDHP04406 335 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PTMAP06454 111 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CAPN1P07384 714 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ADRA2AP08913 450 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PPIAL4FP0DN26 164 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CCNB1P14635 433 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NCK1P16333 377 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 UGT2B7P16662 529 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF24P17028 368 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF30P17039 623 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DESP17661 470 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 IL1RNP18510 177 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TCN1P20061 433 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TBPP20226 339 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NT5EP21589 574 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DRD5P21918 477 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CMA1P23946 247 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 MMP11P24347 488 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CD1CP29017 333 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR1E1P30953 314 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PCK1P35558 622 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SOX6P35712 828 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 COILP38432 576 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CD86P42081 329 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SYKP43405 635 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GPR1P46091 355 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GABRA4P48169 554 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TFPI2P48307 235 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DNASE1L1P49184 302 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CX3CR1P49238 355 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ERVK-25P63136 954 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 UBE2IP63279 158 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CRADDP78560 199 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GBE1Q04446 702 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SCRN3Q0VDG4 424 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ECH1Q13011 328 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 AQP6Q13520 282 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GINS1Q14691 196 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GANABQ14697 944 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NCF4Q15080 339 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TSC22D1Q15714 1073 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CHRNA6Q15825 494 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZSCAN26Q16670 478 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CARD16Q5EG05 197 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 LY6G6FQ5SQ64 297 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CASC10Q5T4H9 136 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 HES5Q5TA89 166 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RIPPLY2Q5TAB7 128 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2G6Q5TZ20 316 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PRAMEF20Q5VT98 475 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 MLIPQ5VWP3 458 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 FBXW9Q5XUX1 488 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NCBP2-AS2Q69YL0 99 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CTRB2Q6GPI1 263 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GALNT17Q6IS24 598 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PYHIN1Q6K0P9 492 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAJC24Q6P3W2 148 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 LRRC74BQ6ZQY2 392 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CCDC73Q6ZRK6 1079 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 H2AFVQ71UI9 128 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF550Q7Z398 422 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GALNT10Q86SR1 603 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OAFQ86UD1 273 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZSCAN30Q86W11 494 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 UNC93AQ86WB7 457 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GKN2Q86XP6 184 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CRLF3Q8IUI8 442 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NUDCD3Q8IVD9 361 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF547Q8IVP9 402 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ATPAF2Q8N5M1 289 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CEP112Q8N8E3 955 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF321PQ8N8H1 164 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ANKFN1Q8N957 763 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF709Q8N972 641 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 Q8N976 141 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GPR26Q8NDV2 337 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 FBXL13Q8NEE6 735 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NPBQ8NG41 125 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5T3Q8NGG3 340 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR56A4Q8NGH8 313 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR52K1Q8NGK4 314 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5AR1Q8NGP9 310 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR13C4Q8NGS5 318 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR2G3Q8NGZ4 309 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OR5W2Q8NH69 310 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ACTRT1Q8TDG2 376 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PYROXD1Q8WU10 500 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 UBE2Q2Q8WVN8 375 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RXFP2Q8WXD0 754 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ACOT11Q8WXI4 607 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NAT6Q93015 286 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 STMN2Q93045 179 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 UBE2E3Q969T4 207 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.65□□□□□ -2.312e-10■■■■■ 34
SMARCB1-209ENST00000635578 KIAA1143Q96AT1 154 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SGK3Q96BR1 496 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms