RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 OR8D2Q9GZM6 311 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 NXF5Q9H1B4 397 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 OPN3Q9H1Y3 402 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RPF2Q9H7B2 306 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF122Q9H9V4 155 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 PNO1Q9NRX1 252 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 LYARQ9NX58 379 aaKnown RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 BOKQ9UMX3 212 aaPredicted RBP1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 RASD1Q9Y272 281 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 MAD1L1Q9Y6D9 718 aa1.91□□□□□ -2.1
SMARCB1-208ENST00000634926 TENM3Q9P273 2699 aa1.9□□□□□ -2.1
SMARCB1-208ENST00000634926 TCRBV9S1A1TA0A576 114 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FRG2CA6NGY1 282 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OR6C70A6NIJ9 312 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM159BA6NKW6 160 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 C17orf51A8MQB3 221 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FAM220BPB1ANY3 271 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 EEF1E1-BLOC1S5C9J1V9 151 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 E9PQ18 207 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FOXE1O00358 373 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC17A2O00624 439 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ACOX3O15254 700 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 EEF1E1O43324 174 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FCMRO60667 390 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SS18L1O75177 396 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CDH16O75309 829 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 UGT2B11O75310 529 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 GCM2O75603 506 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 STK16O75716 305 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 PIAS1O75925 651 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 GPR75O95800 540 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CA1P00915 261 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CD8AP01732 235 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SERPIND1P05546 499 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CD55P08174 381 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 IFI6P09912 130 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC35E2P0CK97 266 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 PNMTP11086 282 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 UMPSP11172 480 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 GDF1P27539 372 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ACVR1BP36896 505 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 MAP3K8P41279 467 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ELK3P41970 407 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SSR2P43308 183 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 P2RY1P47900 373 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CCT3P49368 545 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 TMED10P49755 219 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ATP5IP56385 69 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 GPX6P59796 221 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ACTR3P61158 418 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 KCNJ2P63252 427 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SARNPP82979 210 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 HMGCS1Q01581 520 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 BIKQ13323 160 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 LAGE3Q14657 143 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 LTB4RQ15722 352 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 BCL2A1Q16548 175 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 TIGITQ495A1 244 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FBXO48Q5FWF7 155 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF57Q68EA5 555 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 LEMD1Q68G75 181 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OR52E8Q6IFG1 317 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 C11orf71Q6IPW1 123 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 SLC48A1Q6P1K1 146 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF343Q6P1L6 599 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 KCNIP4Q6PIL6 250 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 REG3GQ6UW15 175 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZYG11AQ6WRX3 759 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF600Q6ZNG1 722 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 HIPK1Q86Z02 1210 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CDH26Q8IXH8 852 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF440Q8IYI8 595 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 TMEM123Q8N131 208 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 LINC01561Q8N1V8 128 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 TCAIMQ8N3R3 496 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 FGFRL1Q8N441 504 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 DHRSXQ8N5I4 330 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 TBC1D19Q8N5T2 526 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OR7G1Q8NGA0 311 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OR56B2PQ8NGI1 322 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OR8J1Q8NGP2 316 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 RHEBL1Q8TAI7 183 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 LINC01560Q8TB33 94 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZNF675Q8TD23 568 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ADAMTS16Q8TE57 1224 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ITLN1Q8WWA0 313 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 UCN3Q969E3 161 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 PPWD1Q96BP3 646 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ZBED6CLQ96FA7 236 aaPredicted RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CMTM7Q96FZ5 175 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 WFIKKN1Q96NZ8 548 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 HBEGFQ99075 208 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 RBBP8Q99708 897 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 CCL19Q99731 98 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 RBM4BQ9BQ04 359 aaKnown RBP1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 KLHDC3Q9BQ90 382 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 OSBPL11Q9BXB4 747 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 GON7Q9BXV9 100 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 PARD6BQ9BYG5 372 aa1.9□□□□□ -2.11
SMARCB1-208ENST00000634926 ROGDIQ9GZN7 287 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms