RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SLC35D3Q5M8T2 416 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF684Q5T5D7 378 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 UNQ9370/PRO34162Q6UXP9 181 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 DPY19L2P2Q6ZN68 376 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CEACAM19Q7Z692 300 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SLC35F2Q8IXU6 374 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LRRC75AQ8NAA5 344 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SDR9C7Q8NEX9 313 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR52E2Q8NGJ4 325 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR13C5Q8NGS8 318 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 TRMT10AQ8TBZ6 339 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNRF4Q8WWF5 429 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GHSRQ92847 366 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CPNE4Q96A23 557 aaPredicted RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ADGRG7Q96K78 797 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ERMAPQ96PL5 475 aaPredicted RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 SPATA25Q9BR10 227 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM204Q9BSN7 226 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 WACQ9BTA9 647 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 MARCH7Q9H992 704 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 BARX1Q9HBU1 254 aaPredicted RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 GLRX2Q9NS18 164 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 KLHL9Q9P2J3 617 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FAM25AB3EWG3 89 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FAM25CB3EWG5 89 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FAM25GB3EWG6 89 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF814B7Z6K7 855 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OVOL3O00110 214 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PAHP00439 452 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 TGFAP01135 160 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PSKH1P11801 424 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PYCR1P32322 319 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PITPNBP48739 271 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RNPS1Q15287 305 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 CCDC58Q4VC31 144 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 Q5BKY6 102 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LINC01590Q5TEZ4 76 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 PYHIN1Q6K0P9 492 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 TMEM108Q6UXF1 575 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 FAM122BQ7Z309 247 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZNF440Q8IYI8 595 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 LRRC17Q8N6Y2 441 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 OR4K13Q8NH42 304 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RNF128Q8TEB7 428 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RFT1Q96AA3 541 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZBTB8AQ96BR9 441 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ZMYND19Q96E35 227 aaPredicted RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 RNF125Q96EQ8 232 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 POTEKPQ9BYX7 375 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 NIPAL2Q9H841 368 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 EXOSC3Q9NQT5 275 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 DDX28Q9NUL7 540 aaKnown RBP4.18□□□□□ -1.74
LINC00550-201ENST00000629293 NLKQ9UBE8 527 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 COPS3Q9UNS2 423 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 ADAM18Q9Y3Q7 739 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 IER3IP1Q9Y5U9 82 aa4.18□□□□□ -1.74
LINC00550-201ENST00000629293 A0A087WZY1 265 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 FAM240BA0A1B0GVZ2 78 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 C7orf66A4D0T2 115 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 E7EQL1 145 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SULT2B1O00204 365 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 EFNA2O43921 213 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GATBO75879 557 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SERPINA3P01011 423 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CSTAP01040 98 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 APEHP13798 732 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ARSBP15848 533 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SPI1P17947 270 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ATF1P18846 271 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RAB3BP20337 219 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 S100A1P23297 94 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 AHCYP23526 432 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SRP14P37108 136 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 GDI2P50395 445 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SLC25A1P53007 311 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 FAM3BP58499 235 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RRAS2P62070 204 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 HSF2Q03933 536 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SKP2Q13309 424 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 P2RY6Q15077 328 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SLC36A2Q495M3 483 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 TP53I3Q53FA7 332 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 RPL22L1Q6P5R6 122 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 CADM2Q8N3J6 435 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SAMD12Q8N8I0 201 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ASCC1Q8N9N2 400 aaKnown RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 OR5H6Q8NGV6 325 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ZFAND1Q8TCF1 268 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 IGFBPL1Q8WX77 278 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 PHYHIPQ92561 330 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ABHD1Q96SE0 405 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 THAP7Q9BT49 309 aaPredicted RBP4.17□□□□□ -1.74
LINC00550-201ENST00000629293 OR10A2Q9H208 303 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SLC25A32Q9H2D1 315 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 SLA2Q9H6Q3 261 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 PLSCR3Q9NRY6 295 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 ABRACLQ9P1F3 81 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 KCNS2Q9ULS6 477 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 A0A1W2PRG6 482 aa4.17□□□□□ -1.74
LINC00550-201ENST00000629293 OR6C68A6NDL8 312 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms