RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 HTR5AP47898 357 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 TMEM50BP56557 158 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 PLGLB1Q02325 96 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 ZMYND11Q15326 602 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 SLC22A6Q4U2R8 563 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 C4orf46Q504U0 113 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 TSPO2Q5TGU0 170 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 C1QL2Q7Z5L3 287 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 SKA3Q8IX90 412 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 FAM89BQ8N5H3 189 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 OR2AK2Q8NG84 335 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 MARVELD3Q96A59 401 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 LINC00470Q9BZP3 86 aa17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 EIF3KQ9UBQ5 218 aaKnown RBP17.21■□□□□ 0.35
PCDHB11-202ENST00000624887 NME2P1O60361 137 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 FCGR2AP12318 317 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 TBPP20226 339 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 NME2P22392 152 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 SCGB2B2Q4G0G5 96 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 ATPAF1Q5TC12 328 aaPredicted RBP17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 OR52W1Q6IF63 320 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 GALNTL5Q7Z4T8 443 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 CD163Q86VB7 1156 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 OR5D18Q8NGL1 313 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 FGFBP3Q8TAT2 258 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 REEP6Q96HR9 211 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 ANAPC10Q9UM13 185 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 PLEKHA6Q9Y2H5 1048 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 TSC22D2O75157 780 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 SYNGR4O95473 234 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 LCATP04180 440 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 OR4E1P0C645 316 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 ACKR3P25106 362 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 HTR2BP41595 481 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 RPS27AP62979 156 aaKnown RBP17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 CXADRP78310 365 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 NKPD1Q17RQ9 610 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 PNLIPRP3Q17RR3 467 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 OR2AE1Q8NHA4 323 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 TNFAIP8L1Q8WVP5 186 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 SNAPC3Q92966 411 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 PARPBPQ9NWS1 579 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF391Q9UJN7 358 aa17.2■□□□□ 0.34
PCDHB11-202ENST00000624887 FARS2O95363 451 aaKnown RBP17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 CSN2P05814 226 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 MMP7P09237 267 aaPredicted RBP17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 M6PRP20645 277 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 MEOX1P50221 254 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 PER3P56645 1201 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 TMED4Q7Z7H5 227 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 MCTS1Q9ULC4 181 aaKnown RBP17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 MYO7BQ6PIF6 2116 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 KLRC4-KLRK1H3BQV0 150 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 H3BUI4 141 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 MFNGO00587 321 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 HRH1P35367 487 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 TSPAN5P62079 268 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 DHODHQ02127 395 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 RIPPLY1Q0D2K3 151 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 C2orf68Q2NKX9 166 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 FTMTQ8N4E7 242 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 PIGTQ969N2 578 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 SPSB1Q96BD6 273 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 HEXA-AS1Q9H8Q6 139 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 SLC7A10Q9NS82 523 aa17.19■□□□□ 0.34
PCDHB11-202ENST00000624887 IGHV3-9P01782 118 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 MGMTP16455 207 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 NAT1P18440 290 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 CD82P27701 267 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 OR3A3P47888 321 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF81P51508 661 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 H2BFSP57053 126 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 UBE2MP61081 183 aaKnown RBP17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 IKZF1Q13422 519 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 MPPED2Q15777 294 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 STK11Q15831 433 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 TUSC5Q8IXB3 177 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 OR51T1Q8NGJ9 327 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 SUN5Q8TC36 379 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 ARHGAP5-AS1Q96IT6 56 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 S100A13Q99584 98 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 RGCCQ9H4X1 137 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 OPN4Q9UHM6 478 aa17.18■□□□□ 0.34
PCDHB11-202ENST00000624887 FOXI3A8MTJ6 420 aaPredicted RBP17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 RPL36A-HNRNPH2H7BZ11 118 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 ATP1A1-AS1Q5TC04 95 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 ZBTB37Q5TC79 503 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 PLXDC2Q6UX71 529 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 ZDHHC22Q8N966 263 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 UXS1Q8NBZ7 420 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 STEAP2Q8NFT2 490 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 OR8H1Q8NGG4 311 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 FNDC9Q8TBE3 224 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 MRGPRFQ96AM1 343 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 TM2D1Q9BX74 207 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 TMPRSS13Q9BYE2 586 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 RNF122Q9H9V4 155 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 BCO1Q9HAY6 547 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms