RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 GSTT2BP0CG30 244 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 PRSS3P35030 304 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 WNT5AP41221 380 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 MTCP1P56278 107 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 AP3S2P59780 193 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 MRPL49Q13405 166 aaKnown RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 KLF9Q13886 244 aaPredicted RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 HLXQ14774 488 aaPredicted RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 PLCXD3Q63HM9 321 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 RAB12Q6IQ22 244 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 PLET1Q6UQ28 207 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 GLCCI1Q86VQ1 547 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 OR56B2PQ8NGI1 322 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 OR5L1Q8NGL2 311 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 KCNG3Q8TAE7 436 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 ITPKCQ96DU7 683 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 OPA3Q9H6K4 179 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 NLKQ9UBE8 527 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 KLK11Q9UBX7 282 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 SLC7A11Q9UPY5 501 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 RBMX2Q9Y388 322 aaKnown RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 DMXL2Q8TDJ6 3036 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 SCGNO76038 276 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 P2RY6Q15077 328 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 MOGAT2Q3SYC2 334 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 CRIP3Q6Q6R5 217 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 LHFPL2Q6ZUX7 228 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 UBASH3BQ8TF42 649 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 SNRNP40Q96DI7 357 aaKnown RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 BORCS8Q96FH0 119 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 C1orf147Q96MC9 270 aaPredicted RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 TECTBQ96PL2 329 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 C7orf50Q9BRJ6 194 aaKnown RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 TP63Q9H3D4 680 aaPredicted RBP18.54■□□□□ 0.56
SPAST-204ENST00000621856 POFUT1Q9H488 388 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 GHRLQ9UBU3 117 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 TUBD1Q9UJT1 453 aa18.54■□□□□ 0.56
SPAST-204ENST00000621856 C1QTNF9BB2RNN3 333 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 CDC14BO60729 498 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 CRTAPO75718 401 aaPredicted RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 RBBP9O75884 186 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 C1QTNF9P0C862 333 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 GUCA2AQ02747 115 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 DYRK1AQ13627 763 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 SLC22A6Q4U2R8 563 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 RSBN1Q5VWQ0 802 aaPredicted RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 BHLHA15Q7RTS1 189 aaPredicted RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 MYPOPQ86VE0 399 aaPredicted RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 WDR31Q8NA23 367 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 CHST4Q8NCG5 386 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 DUSP18Q8NEJ0 188 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 BOD1Q96IK1 185 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 SLX1AQ9BQ83 275 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 TMEM59Q9BXS4 323 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 BANF2Q9H503 90 aa18.53■□□□□ 0.56
SPAST-204ENST00000621856 ELL3Q9HB65 397 aaPredicted RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 EIF3KQ9UBQ5 218 aaKnown RBP18.53■□□□□ 0.56
SPAST-204ENST00000621856 VEGFCP49767 419 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 RBP2P50120 134 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 PRR30Q53SZ7 412 aaPredicted RBP18.52■□□□□ 0.56
SPAST-204ENST00000621856 DNM1P46Q6ZS02 220 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 RFPL4BQ6ZWI9 263 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 C17orf78Q8N4C9 275 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 TMEM104Q8NE00 496 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 CST11Q9H112 138 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 ASF1BQ9NVP2 202 aa18.52■□□□□ 0.56
SPAST-204ENST00000621856 ZNF850A8MQ14 1090 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 AGFG2O95081 481 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 MT-ND4P03905 459 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 FAM157BP0CG42 384 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 TMEM225BP0DP42 221 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 GLI4P10075 376 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 NAT2P11245 290 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 CBR1P16152 277 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 CEACAM8P31997 349 aaPredicted RBP18.52■□□□□ 0.55
SPAST-204ENST00000621856 ALDH3B1P43353 468 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 FUT6P51993 359 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 SNTB2Q13425 540 aaKnown RBP18.52■□□□□ 0.55
SPAST-204ENST00000621856 C1QL2Q7Z5L3 287 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 CSNK2A3Q8NEV1 391 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 RNF170Q96K19 258 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 SFXN3Q9BWM7 321 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 PAPOLGQ9BWT3 736 aaKnown RBP18.52■□□□□ 0.55
SPAST-204ENST00000621856 C1QTNF6Q9BXI9 259 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 LPAR5Q9H1C0 372 aa18.52■□□□□ 0.55
SPAST-204ENST00000621856 A0A1W2PP11 408 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 ANKRD20A5PA0PJZ0 165 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 H7C417 338 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 RAB27BO00194 218 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 SLC6A1P30531 599 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 ATP1B3P54709 279 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 FAM189A2Q15884 450 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 CARTPTQ16568 116 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 DOLPP1Q86YN1 238 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 CMBLQ96DG6 245 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 URM1Q9BTM9 101 aaKnown RBP18.51■□□□□ 0.55
SPAST-204ENST00000621856 DPAGT1Q9H3H5 408 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 ZMAT3Q9HA38 289 aaKnown RBP18.51■□□□□ 0.55
SPAST-204ENST00000621856 MTFP1Q9UDX5 166 aa18.51■□□□□ 0.55
SPAST-204ENST00000621856 GPR160Q9UJ42 338 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms