RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 KRTAP1-1Q07627 177 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 RIPPLY1Q0D2K3 151 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF154Q13106 437 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 ZBTB37Q5TC79 503 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 MOGAT3Q86VF5 341 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 C11orf53Q8IXP5 236 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 FTMTQ8N4E7 242 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 OR52N1Q8NH53 320 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 OR5P3Q8WZ94 311 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 PIGCQ92535 297 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 ITFG2Q969R8 447 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 MRPL48Q96GC5 212 aaKnown RBP12.06□□□□□ -0.48
CBWD3-217ENST00000621474 PDCD1LG2Q9BQ51 273 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 DUSP21Q9H596 190 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 WIPI2Q9Y4P8 454 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 MPC1Q9Y5U8 109 aa12.06□□□□□ -0.48
CBWD3-217ENST00000621474 LRP5LA4QPB2 252 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 PTGES3LE9PB15 166 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 SYT7O43581 403 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 MTRF1O75570 445 aaKnown RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 FOSL1P15407 271 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 USF1P22415 310 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 IL2RGP31785 369 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 GPR6P46095 362 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 CDK5R1Q15078 307 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 SNCBQ16143 134 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF181Q2M3W8 571 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 FAM76BQ5HYJ3 339 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 CEP78Q5JTW2 689 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 AVPI1Q5T686 147 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 STX19Q8N4C7 294 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 KLHL36Q8N4N3 616 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 Q8TCH9 128 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 GATAD2BQ8WXI9 593 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 UFSP2Q9NUQ7 469 aa12.05□□□□□ -0.48
CBWD3-217ENST00000621474 NOP16Q9Y3C1 178 aaKnown RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 ANK3Q12955 4377 aaKnown RBP12.05□□□□□ -0.48
CBWD3-217ENST00000621474 A0A1B0GVI7 797 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 PPIHO43447 177 aaKnown RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 IGHV2-70P01814 119 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 GNALP38405 381 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 MRPL28Q13084 256 aaKnown RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 RNLSQ5VYX0 342 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 TMPRSS11AQ6ZMR5 421 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF826PQ6ZT77 177 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ZDHHC23Q8IYP9 409 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 NANOGP1Q8N7R0 232 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 SPERTQ8NA61 448 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 OR1M1Q8NGA1 313 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 OR8S1Q8NH09 359 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 RGP1Q92546 391 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CDCA4Q9BXL8 241 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 TLNRD1Q9H1K6 362 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 BABAM2Q9NXR7 383 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ENPP5Q9UJA9 477 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 GBX2P52951 348 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 IRF3Q14653 427 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CEACAM21Q3KPI0 293 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CCDC58Q4VC31 144 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM244Q5VVB8 128 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 LURAP1LQ8IV03 231 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 CLDND2Q8NHS1 167 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 HAVCR2Q8TDQ0 301 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ERGIC1Q969X5 290 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ADAT3Q96EY9 351 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 GSX1Q9H4S2 264 aaPredicted RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 NARFLQ9H6Q4 476 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ERVK-18Q9QC07 812 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
CBWD3-217ENST00000621474 NPTNQ9Y639 398 aa12.04□□□□□ -0.48
CBWD3-217ENST00000621474 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.03□□□□□ -0.48
CBWD3-217ENST00000621474 TRBV2A0A0J9YWF9 115 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM212A6NML5 194 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 ANXA2P2A6NMY6 339 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 OGG1O15527 345 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 NRASP01111 189 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 GRPP07492 148 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 WNT4P56705 351 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 ZMYND11Q15326 602 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 UBE2V2Q15819 145 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 FAM201AQ5SY85 155 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 RPL22L1Q6P5R6 122 aaKnown RBP12.03□□□□□ -0.48
CBWD3-217ENST00000621474 SMIM19Q96E16 107 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 PGLYRP3Q96LB9 341 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 CHST5Q9GZS9 411 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 ABCB9Q9NP78 766 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 GPR173Q9NS66 373 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 C14orf119Q9NWQ9 140 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 TPRKBQ9Y3C4 175 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 CUBNO60494 3623 aa12.03□□□□□ -0.48
CBWD3-217ENST00000621474 ZNF205O95201 554 aa12.02□□□□□ -0.49
CBWD3-217ENST00000621474 GPM6AP51674 278 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms