RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CCDC124Q96CT7 223 aaKnown RBP9.41□□□□□ -0.9
CPNE3-210ENST00000621245 FEVQ99581 238 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 SLITRK2Q9H156 845 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 OR51V1Q9H2C8 321 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 MAGIXQ9H6Y5 334 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 REEP1Q9H902 201 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 SIRT7Q9NRC8 400 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 SNTG1Q9NSN8 517 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 ACOXLQ9NUZ1 547 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 NOP16Q9Y3C1 178 aaKnown RBP9.41□□□□□ -0.9
CPNE3-210ENST00000621245 MMP24Q9Y5R2 645 aa9.41□□□□□ -0.9
CPNE3-210ENST00000621245 RIIAD1A6NNX1 92 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 RNASEK-C17orf49H0YIS7 233 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 CDIPTO14735 213 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 GPR137BO60478 399 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 DCTN3O75935 186 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 GLCEO94923 617 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF3P17036 446 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 GRK5P34947 590 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 NAA10P41227 235 aaPredicted RBP9.4□□□□□ -0.9
CPNE3-210ENST00000621245 HCCSP53701 268 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 GRB2P62993 217 aaKnown RBP9.4□□□□□ -0.9
CPNE3-210ENST00000621245 DEFA6Q01524 100 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 KCNJ8Q15842 424 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 TAF9Q16594 264 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 SPATS1Q496A3 300 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 METTL11BQ5VVY1 283 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 CD276Q5ZPR3 534 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 PLBD1Q6P4A8 553 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 DHFR2Q86XF0 187 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 PNLDC1Q8NA58 520 aaKnown RBP9.4□□□□□ -0.9
CPNE3-210ENST00000621245 LY6G5BQ8NDX9 201 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 OR8B12Q8NGG6 310 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 PGAM5Q96HS1 289 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 GAFA1Q96PS6 74 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 CITED1Q99966 193 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 PAPOLGQ9BWT3 736 aaKnown RBP9.4□□□□□ -0.9
CPNE3-210ENST00000621245 TLNRD1Q9H1K6 362 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 OPA3Q9H6K4 179 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 ELL3Q9HB65 397 aaPredicted RBP9.4□□□□□ -0.9
CPNE3-210ENST00000621245 NOX4Q9NPH5 578 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 C14orf119Q9NWQ9 140 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 ONECUT1Q9UBC0 465 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 KAAG1Q9UBP8 84 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 BAIAP2Q9UQB8 552 aa9.4□□□□□ -0.9
CPNE3-210ENST00000621245 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.39□□□□□ -0.91
CPNE3-210ENST00000621245 ZNF850A8MQ14 1090 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 H3BN98 237 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 PSMD9O00233 223 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 ATP8B1O43520 1251 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 NDUFA7O95182 113 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 KNG1P01042 644 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 IFNGP01579 166 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 PAX6P26367 422 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 POU1F1P28069 291 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 ID3Q02535 119 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 PRDX4Q13162 271 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 TRIM25Q14258 630 aaKnown RBP9.39□□□□□ -0.91
CPNE3-210ENST00000621245 DGUOKQ16854 277 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 ZBTB37Q5TC79 503 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 TMEM236Q5W0B7 351 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 OLFML2AQ68BL7 652 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 CD300LDQ6UXZ3 194 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 LDLRAD3Q86YD5 345 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 SPERTQ8NA61 448 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 TEX47Q8TBZ9 253 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 NSL1Q96IY1 281 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 PKP2Q99959 881 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 TTTY10Q9BZA0 68 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 NDE1Q9NXR1 346 aa9.39□□□□□ -0.91
CPNE3-210ENST00000621245 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
CPNE3-210ENST00000621245 M0R129 80 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 AKR7A2O43488 359 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 NDUFA2O43678 99 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 RHBDL1O75783 438 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 TSPAN15O95858 294 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 LIPFP07098 398 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 H2BFMP0C1H6 154 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 PRKACGP22612 351 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 SLC2A5P22732 501 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 DCTDP32321 178 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 DDOSTP39656 456 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 IER3P46695 156 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 TGM4P49221 684 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 GINS1Q14691 196 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 PDCD1Q15116 288 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 CDONQ4KMG0 1287 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 MIDNQ504T8 468 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 FAM98BQ52LJ0 330 aaKnown RBP9.38□□□□□ -0.91
CPNE3-210ENST00000621245 PDLIM3Q53GG5 364 aaPredicted RBP9.38□□□□□ -0.91
CPNE3-210ENST00000621245 TMEM86BQ8N661 226 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 SCCPDHQ8NBX0 429 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 OR4F5Q8NH21 305 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 OTOSQ8NHW6 89 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 GIPC3Q8TF64 312 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 C17orf50Q8WW18 174 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 SSMEM1Q8WWF3 244 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 OR5P3Q8WZ94 311 aa9.38□□□□□ -0.91
CPNE3-210ENST00000621245 CHID1Q9BWS9 393 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms