RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 WDR86Q86TI4 376 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 OR5P3Q8WZ94 311 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 GGHQ92820 318 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 MSI2Q96DH6 328 aaKnown RBP15.38■□□□□ 0.05
LITAF-220ENST00000620789 C1orf159Q96HA4 380 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 GAL3ST1Q99999 423 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 RTL8AQ9BWD3 113 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 PLCXD1Q9NUJ7 323 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 FRRS1LQ9P0K9 344 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 RRP15Q9Y3B9 282 aaKnown RBP15.38■□□□□ 0.05
LITAF-220ENST00000620789 ABCA2Q9BZC7 2435 aa15.38■□□□□ 0.05
LITAF-220ENST00000620789 SYT7O43581 403 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 PIPP12273 146 aaPredicted RBP15.37■□□□□ 0.05
LITAF-220ENST00000620789 HSPA13P48723 471 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 ETV1P50549 477 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 CCR9P51686 369 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 MRPL28Q13084 256 aaKnown RBP15.37■□□□□ 0.05
LITAF-220ENST00000620789 LRRC28Q86X40 367 aaPredicted RBP15.37■□□□□ 0.05
LITAF-220ENST00000620789 CCDC54Q8NEL0 328 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 OR1M1Q8NGA1 313 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 HPSE2Q8WWQ2 592 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 TMEM80Q96HE8 168 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 HIST1H2AAQ96QV6 131 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 ZNF665Q9H7R5 613 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 C1orf123Q9NWV4 160 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 CNOT2Q9NZN8 540 aaKnown RBP15.37■□□□□ 0.05
LITAF-220ENST00000620789 RNF7Q9UBF6 113 aa15.37■□□□□ 0.05
LITAF-220ENST00000620789 EXOSC1Q9Y3B2 195 aaKnown RBP15.37■□□□□ 0.05
LITAF-220ENST00000620789 LOC107986453A0A1B0GWG9 222 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 EFCAB10A6NFE3 127 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 A6NLC8 198 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 TMEM210A6NLX4 147 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 XPNPEP2O43895 674 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 FSTL3O95633 263 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 IGHV2-5P01817 119 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 MYL12AP19105 171 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 THBS2P35442 1172 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 MDH2P40926 338 aaKnown RBP15.36■□□□□ 0.05
LITAF-220ENST00000620789 CDH15P55291 814 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 ZNF154Q13106 437 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 ALKBH1Q13686 389 aaKnown RBP15.36■□□□□ 0.05
LITAF-220ENST00000620789 CEACAM21Q3KPI0 293 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 TMEM155Q4W5P6 130 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 CEP78Q5JTW2 689 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 TMEM244Q5VVB8 128 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 TMEM42Q69YG0 159 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 MUC20Q8N307 709 aaPredicted RBP15.36■□□□□ 0.05
LITAF-220ENST00000620789 SPICQ8N5J4 248 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 BPIFB6Q8NFQ5 453 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 HAVCR2Q8TDQ0 301 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 RAB39BQ96DA2 213 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 RNF170Q96K19 258 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 ANKRD60Q9BZ19 345 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 FGF23Q9GZV9 251 aaPredicted RBP15.36■□□□□ 0.05
LITAF-220ENST00000620789 TLNRD1Q9H1K6 362 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 PLEKHA1Q9HB21 404 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 UBAP1Q9NZ09 502 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 PSORS1C1Q9UIG5 152 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 CAB39Q9Y376 341 aaPredicted RBP15.36■□□□□ 0.05
LITAF-220ENST00000620789 NF1P21359 2839 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 HIVEP2P31629 2446 aa15.36■□□□□ 0.05
LITAF-220ENST00000620789 PPIAL4EA0A075B759 164 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 OR4C45A6NMZ5 311 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 FAM157AC9JC47 383 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 PPIAL4DF5H284 164 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 H3BSH0 61 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 ZNF205O95201 554 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 NRASP01111 189 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 ISG15P05161 165 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 PPIAL4FP0DN26 164 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 ZNF12P17014 697 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 MYF6P23409 242 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 GBX2P52951 348 aaPredicted RBP15.35■□□□□ 0.05
LITAF-220ENST00000620789 CSNK2BP67870 215 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 ST3GAL4Q11206 333 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 MED21Q13503 144 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 FAM201AQ5SY85 155 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 CLVS2Q5SYC1 327 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 PLCXD3Q63HM9 321 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 TMPRSS11AQ6ZMR5 421 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 ZNF826PQ6ZT77 177 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 MOB3CQ70IA8 216 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 C11orf53Q8IXP5 236 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 RDH10Q8IZV5 341 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 KLHL36Q8N4N3 616 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 LINC01356Q8N9X3 169 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 YAE1D1Q9NRH1 226 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 PPIAL4AQ9Y536 164 aa15.35■□□□□ 0.05
LITAF-220ENST00000620789 NIPBLQ6KC79 2804 aaeCLIP15.35■□□□□ 0.05
LITAF-220ENST00000620789 SETD2Q9BYW2 2564 aaPredicted RBP15.35■□□□□ 0.05
LITAF-220ENST00000620789 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.34■□□□□ 0.052e-11■□□□□ 8.5
LITAF-220ENST00000620789 hCG_1807616A0A1W2PRN6 198 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 A6NIN4 97 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 A8MV72 311 aaPredicted RBP15.34■□□□□ 0.05
LITAF-220ENST00000620789 B4DSR2 109 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 E9PI62 339 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 TGFAP01135 160 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 VHLP40337 213 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 TGM4P49221 684 aa15.34■□□□□ 0.05
LITAF-220ENST00000620789 GPM6AP51674 278 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms