RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 FGF16O43320 207 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 IFNA14P01570 189 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 APOC1P02654 83 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DBHP09172 617 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A15PP0C7V4 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A13PP0C7W8 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A14PP0C7W9 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FAM90A24PP0C7X0 464 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 GLIPR1P48060 266 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 CRYBA2P53672 197 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ACSM6Q6P461 480 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ERICH5Q6P6B1 374 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DLEU7Q6UYE1 221 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 MBOAT2Q6ZWT7 520 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 OR2W3Q7Z3T1 314 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 C10orf111Q8N326 155 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 C11orf44Q8N8P7 122 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 AGR3Q8TD06 166 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 CREB3L1Q96BA8 519 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 SLCO4A1Q96BD0 722 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 MICU1Q9BPX6 476 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 VIPAS39Q9H9C1 493 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 HES4Q9HCC6 221 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 THAP1Q9NVV9 213 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FRAS1Q86XX4 4008 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DSCAML1Q8TD84 2053 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 A0A1B0GW55 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 A0A1W2PQ09 198 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 PSMB11A5LHX3 300 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 OR6C68A6NDL8 312 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ACOD1A6NK06 481 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 EFCAB9A8MZ26 197 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ARPC3O15145 178 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 RER1O15258 196 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 BPNT1O95861 308 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 NPPAP01160 153 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 HLA-DPB1P04440 258 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L2P0CJ85 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L3P0CJ86 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L4P0CJ87 422 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L5P0CJ88 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L6P0CJ89 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L7P0CJ90 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 MTNR1BP49286 362 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 CENPAP49450 140 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 LGALS4P56470 323 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 TAS2R41P59536 307 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ESRRGP62508 458 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ZNF92Q03936 586 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 STX3Q13277 289 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FOXE3Q13461 319 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4L9Q6RFH8 374 aaPredicted RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 CENPVQ7Z7K6 275 aaPredicted RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 LSRQ86X29 649 aaPredicted RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 NKAIN4Q8IVV8 208 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DYNAPQ8N1N2 210 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 FTMTQ8N4E7 242 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 POC1AQ8NBT0 407 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 OR4Q3Q8NH05 313 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 C4orf3Q8WVX3 66 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 OR5P3Q8WZ94 311 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 KCNJ15Q99712 375 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DUX4Q9UBX2 424 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 PYCARDQ9ULZ3 195 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DNAH17Q9UFH2 4485 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 A0A087X0M5 115 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 A0A1B0GX30 115 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 GGT3PA6NGU5 568 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 H0YAE9 185 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 M0R135 149 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 BHLHE40O14503 412 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 UBDO15205 165 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ATP6V1B1P15313 513 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 IFNA8P32881 189 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 RPS6KA3P51812 740 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 GRB2P62993 217 aaKnown RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 CFHR3Q02985 330 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 HABP2Q14520 560 aaPredicted RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 TRAM2Q15035 370 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 COQ5Q5HYK3 327 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 SBSPONQ8IVN8 264 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ZDHHC21Q8IVQ6 265 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DRAM1Q8N682 238 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 TMEM106AQ96A25 262 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 ZNF799Q96GE5 643 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 DHRS1Q96LJ7 313 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 GON7Q9BXV9 100 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 KAT8Q9H7Z6 458 aaKnown RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 UFSP2Q9NUQ7 469 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 VAPAQ9P0L0 249 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 MRM2Q9UI43 246 aaKnown RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 COA3Q9Y2R0 106 aaPredicted RBP3.62□□□□□ -1.83
SNCA-213ENST00000618500 AP3M1Q9Y2T2 418 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 MOB4Q9Y3A3 225 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 SESN1Q9Y6P5 492 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 HSPE1-MOB4S4R3N1 261 aa3.62□□□□□ -1.83
SNCA-213ENST00000618500 IGKV1D-17A0A075B6S4 117 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 IGHV3OR15-7A0A075B7D8 119 aa3.61□□□□□ -1.83
SNCA-213ENST00000618500 OR2AT4A6NND4 320 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms