RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PRDM13Q9H4Q3 707 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 J3QR06 171 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OGG1O15527 345 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 GYPCP04921 128 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 THBDP07204 575 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CD1DP15813 335 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 HAAOP46952 286 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 JAG1P78504 1218 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MRPL58Q14197 206 aaKnown RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 PGBD5Q8N414 524 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OR1K1Q8NGR3 316 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OR1L4Q8NGR5 311 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 COQ10AQ96MF6 247 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TMEM72A0PK05 275 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 HSBP1L1C9JCN9 74 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CH25HO95992 272 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 VHLP40337 213 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 EFNA4P52798 201 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF45Q02386 682 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SLC35D3Q5M8T2 416 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CASTOR1Q8WTX7 329 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TFAP2CQ92754 450 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TSPAN11A1L157 253 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF688P0C7X2 276 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PIPP12273 146 aaPredicted RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 PTH2RP49190 550 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RAC3P60763 192 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CD226Q15762 336 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PLPP5Q8NEB5 264 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NIPSNAP3BQ9BS92 247 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 C1orf123Q9NWV4 160 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 DKK4Q9UBT3 224 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 FETUBQ9UGM5 382 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LOC105371242A0A075B767 164 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OR2A25A4D2G3 310 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NKX2-6A6NCS4 301 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 BMPR1BO00238 502 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZP1P60852 638 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RHEBQ15382 184 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PROX2Q3B8N5 592 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 DEFB108BQ8NET1 73 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LINC01599Q8WXQ3 324 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SLC25A44Q96H78 314 aaPredicted RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 PCTPQ9UKL6 214 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ISLRO14498 428 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CBFA2T3O75081 653 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ARSBP15848 533 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 C21orf58P58505 322 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LEMD1Q68G75 181 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TMEM64Q6YI46 380 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 DUSP18Q8NEJ0 188 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 YIPF6Q96EC8 236 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OPALINQ96PE5 141 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MS4A8Q9BY19 250 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 LGALS13Q9UHV8 139 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TVP23AA6NH52 213 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SMAD6O43541 496 aaKnown RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 GBAP04062 536 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OR10J4P0C629 311 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 EMX2Q04743 252 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MS4A15Q8N5U1 240 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 HPSE2Q8WWQ2 592 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MIB2Q96AX9 1013 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TMEM101Q96IK0 257 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 BIRC8Q96P09 236 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ALKBH3Q96Q83 286 aaPredicted RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 STUB1Q9UNE7 303 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CEPT1Q9Y6K0 416 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TRAV30A0A087WSZ9 112 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 GOSR2O14653 212 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RBBP9O75884 186 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 GAPDHP04406 335 aaKnown RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 NMUP48645 174 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MTPNP58546 118 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MGAT2Q10469 447 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ELOBQ15370 118 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 IL34Q6ZMJ4 242 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SLC7A5P1Q8MH63 180 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TMEM163Q8TC26 289 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PARD6BQ9BYG5 372 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NINJ2Q9NZG7 142 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 PRSS2P07478 247 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 MYF6P23409 242 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 NR4A2P43354 598 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 C19orf54Q5BKX5 351 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 TMEM252Q8N6L7 170 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 OR1F12Q8NHA8 337 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 HARBI1Q96MB7 349 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RASL10BQ96S79 203 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SLC25A33Q9BSK2 321 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RIMS3Q9UJD0 308 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 K7ERQ8 282 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 ZNF354AO60765 605 aaPredicted RBP2.97□□□□□ -1.93
LPP-220ENST00000617246 HLA-DPB1P04440 258 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 THBS1P07996 1170 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 FUT1P19526 365 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CLEC6AQ6EIG7 209 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 CCDC190Q86UF4 302 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 RNF141Q8WVD5 230 aa2.97□□□□□ -1.93
LPP-220ENST00000617246 SLC35D1Q9NTN3 355 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms