RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 OR4E1P0C645 316 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 FCGR2AP12318 317 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 CBX5P45973 191 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 MEOX1P50221 254 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 NUBP1P53384 320 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 CXADRP78310 365 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 C4orf46Q504U0 113 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 ATPAF1Q5TC12 328 aaPredicted RBP13.72□□□□□ -0.21
NR1H3-235ENST00000616973 ZNF100Q8IYN0 542 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 GVQW1Q8N7I0 195 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 OCSTAMPQ9BR26 566 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 TM2D1Q9BX74 207 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 CHIAQ9BZP6 476 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 BCO1Q9HAY6 547 aa13.72□□□□□ -0.21
NR1H3-235ENST00000616973 EIF3KQ9UBQ5 218 aaKnown RBP13.72□□□□□ -0.21
NR1H3-235ENST00000616973 MCTS1Q9ULC4 181 aaKnown RBP13.72□□□□□ -0.21
NR1H3-235ENST00000616973 ARHGAP21Q5T5U3 1957 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 A0A1W2PP11 408 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 RGS11O94810 467 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 LCATP04180 440 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 PER3P56645 1201 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 SRYQ05066 204 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 SLC22A6Q4U2R8 563 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 ACTBL2Q562R1 376 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 GALNTL5Q7Z4T8 443 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 ZFP62Q8NB50 900 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-235ENST00000616973 UXS1Q8NBZ7 420 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 FGFBP3Q8TAT2 258 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 TNFAIP8L1Q8WVP5 186 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 SNAPC3Q92966 411 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 CPNE2Q96FN4 548 aaPredicted RBP13.71□□□□□ -0.21
NR1H3-235ENST00000616973 HEXA-AS1Q9H8Q6 139 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 ACKR4Q9NPB9 350 aa13.71□□□□□ -0.21
NR1H3-235ENST00000616973 WDFY3Q8IZQ1 3526 aa13.71□□□□□ -0.22
NR1H3-235ENST00000616973 RTTNQ86VV8 2226 aa13.71□□□□□ -0.22
NR1H3-235ENST00000616973 ACTL6AO96019 429 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 PATE4P0C8F1 98 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 CD46P15529 392 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 MGMTP16455 207 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 ZNF24P17028 368 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 ACKR3P25106 362 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 ARL6IP1Q15041 203 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 SCGB2B2Q4G0G5 96 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 OR52W1Q6IF63 320 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 SLC7A10Q9NS82 523 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 CDRT15L2A8MXV6 281 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 CA11O75493 328 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 PRKACBP22694 351 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 HRH1P35367 487 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 CNN3Q15417 329 aaKnown RBP13.7□□□□□ -0.22
NR1H3-235ENST00000616973 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 ZBTB37Q5TC79 503 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 TMEM42Q69YG0 159 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 RTN4RL2Q86UN3 420 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 CD163Q86VB7 1156 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 FTMTQ8N4E7 242 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
NR1H3-235ENST00000616973 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 OR2AE1Q8NHA4 323 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 NPRL2Q8WTW4 380 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 PIGTQ969N2 578 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 S100A13Q99584 98 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 OPN4Q9UHM6 478 aa13.7□□□□□ -0.22
NR1H3-235ENST00000616973 PLSCR5A0PG75 271 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 F5H5P2 479 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 RRADP55042 308 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 TSPAN5P62079 268 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 PPIAP62937 165 aaKnown RBP13.69□□□□□ -0.22
NR1H3-235ENST00000616973 IKZF1Q13422 519 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 GK2Q14410 553 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-235ENST00000616973 RNPS1Q15287 305 aaKnown RBP13.69□□□□□ -0.22
NR1H3-235ENST00000616973 C2orf68Q2NKX9 166 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 VAX1Q5SQQ9 334 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 RTL6Q6ICC9 239 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 FAHD2BQ6P2I3 314 aaPredicted RBP13.69□□□□□ -0.22
NR1H3-235ENST00000616973 TEX261Q6UWH6 196 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.69□□□□□ -0.22
NR1H3-235ENST00000616973 SLC25A42Q86VD7 318 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 TUSC5Q8IXB3 177 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 OR5D18Q8NGL1 313 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 MRGPRFQ96AM1 343 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 FAHD2AQ96GK7 314 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 ARHGAP5-AS1Q96IT6 56 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 PRDM14Q9GZV8 571 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 PARD6AQ9NPB6 346 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 GPR173Q9NS66 373 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 VSIG4Q9Y279 399 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 U3KQ87 197 aa13.69□□□□□ -0.22
NR1H3-235ENST00000616973 GOSR2O14653 212 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 XRCC2O43543 280 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 LRP3O75074 770 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 TSC22D2O75157 780 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 RAD51DO75771 328 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 TOXO94900 526 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 C4BPBP20851 252 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 CPT2P23786 658 aa13.68□□□□□ -0.22
NR1H3-235ENST00000616973 HTR2BP41595 481 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms