RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 RTL8AQ9BWD3 113 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ZMIZ1Q9ULJ6 1067 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PCDHGA9Q9Y5G4 932 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SOCS1O15524 211 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 RGS11O94810 467 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 GZMKP49863 264 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 CASP6P55212 293 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 EGR4Q05215 589 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 TUSC5Q8IXB3 177 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ASB5Q8WWX0 329 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A1W2PQM1 296 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ICMTO60725 284 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ALX3O95076 343 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 IFNA17P01571 189 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 RPL35P42766 123 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 PPP1R1CQ8WVI7 109 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 INTS12Q96CB8 462 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 MUCL1Q96DR8 90 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ZPBPQ9BS86 351 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ELF5Q9UKW6 265 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SPEGQ15772 3267 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 A0A0U1RQK1 487 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 OR4C45A6NMZ5 311 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ADAM11O75078 769 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 DHRS3O75911 302 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 HLA-HP01893 362 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC6A1P30531 599 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 CLEC9AQ6UXN8 241 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC51BQ86UW2 128 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ADAD2Q8NCV1 583 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 OR13C8Q8NGS7 320 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 OR6K3Q8NGY3 331 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SPIN2AQ99865 258 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SPIN2BQ9BPZ2 258 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 CA10Q9NS85 328 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SF3B6Q9Y3B4 125 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 SHISA3A0PJX4 238 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 AQP7P3A6NL99 342 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ERVK-16P61578 105 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 MRGPREQ86SM8 312 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF680Q8NEM1 530 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 ABHD5Q8WTS1 349 aa7.91□□□□□ -1.14
PDLIM5-222ENST00000615540 XRCC2O43543 280 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 TGM6O95932 706 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PTGFRP43088 359 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 RAB1AP62820 205 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 CARFQ8N187 725 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 OR52H1Q8NGJ2 320 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 OR2Y1Q8NGV0 311 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 HAS2Q92819 552 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 KISS1RQ969F8 398 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 LRRC46Q96FV0 321 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 MARVELD1Q9BSK0 173 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 MAGT1Q9H0U3 335 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 KLK13Q9UKR3 277 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 RNF150Q9ULK6 438 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 MEIKINA0A087WXM9 373 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 ADAM10O14672 748 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 GSTZ1O43708 216 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PDGFAP04085 211 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 HIST1H1DP16402 221 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PPT1P50897 306 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 MOGAT2Q3SYC2 334 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 SUMF2Q8NBJ7 301 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 OR56B2PQ8NGI1 322 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 OR6X1Q8NH79 312 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 SAP25Q8TEE9 199 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 SLC25A31Q9H0C2 315 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 MTFP1Q9UDX5 166 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PILRBQ9UKJ0 227 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 SNRPGP15A8MWD9 76 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 HPXP02790 462 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 LIFP15018 202 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 CA6P23280 308 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 HOXA1P49639 335 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 LIMK1P53667 647 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 C19orf57Q0VDD7 668 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 TRIP6Q15654 476 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PECRQ9BY49 303 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 HES7Q9BYE0 225 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 CHST6Q9GZX3 395 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 PRELID1Q9Y255 219 aa7.9□□□□□ -1.14
PDLIM5-222ENST00000615540 ZNF816-ZNF321PA0A0X1KG74 233 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 SULT1C2O00338 296 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 LRP3O75074 770 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 LYZL6O75951 148 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 AGFG2O95081 481 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 IAPPP10997 89 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 OR2T2Q6IF00 324 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 SLC26A10Q8NG04 563 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 NTMQ9P121 344 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 GPR160Q9UJ42 338 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 MS4A18H0YCH9 400 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 HPP00738 406 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 OR5H8P0DN80 308 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 BCL3P20749 454 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 NFYBP25208 207 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 S100A2P29034 98 aa7.9□□□□□ -1.15
PDLIM5-222ENST00000615540 ZNF169Q14929 603 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms