RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PGAP1Q75T13 922 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 OR2W3Q7Z3T1 314 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 TRAPPC6BQ86SZ2 158 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 CMBLQ96DG6 245 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 PRRX2Q99811 253 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 GSX2Q9BZM3 304 aa16.72■□□□□ 0.27
MMP28-204ENST00000615136 KLF13Q9Y2Y9 288 aaPredicted RBP16.72■□□□□ 0.27
MMP28-204ENST00000615136 ZNF32P17041 273 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 SNAI3Q3KNW1 292 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 NHLRC3Q5JS37 347 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 PDSS1Q5T2R2 415 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 C3P1Q6ZMU1 363 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 TUSC5Q8IXB3 177 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 C12orf45Q8N5I9 185 aaPredicted RBP16.71■□□□□ 0.27
MMP28-204ENST00000615136 ZFP62Q8NB50 900 aaPredicted RBP16.71■□□□□ 0.27
MMP28-204ENST00000615136 OR4S1Q8NGB4 309 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 AKR7LQ8NHP1 331 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 FOXB1Q99853 325 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 PRRT1Q99946 306 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 DEFB127Q9H1M4 99 aa16.71■□□□□ 0.27
MMP28-204ENST00000615136 IGKV1-9A0A0C4DH69 117 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 M0R135 149 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 ARPC5O15511 151 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 CRYGSP22914 178 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 S100A11P31949 105 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 RAB14P61106 215 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 ARG2P78540 354 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 CDNFQ49AH0 187 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 RNASE10Q5GAN6 216 aaKnown RBP16.7■□□□□ 0.26
MMP28-204ENST00000615136 LY6G6FQ5SQ64 297 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 DOK3Q7L591 496 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 TMED4Q7Z7H5 227 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 ANGPTL5Q86XS5 388 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 CCDC28AQ8IWP9 274 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 ZNF799Q96GE5 643 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 C1orf147Q96MC9 270 aaPredicted RBP16.7■□□□□ 0.26
MMP28-204ENST00000615136 LAMA5O15230 3695 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 IGKV3D-15A0A087WSY6 115 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 KLRC4-KLRK1H3BQV0 150 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 SGCEO43556 437 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 SYNGR3O43761 229 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 CST2P09228 141 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 LIPCP11150 499 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 AP2S1P53680 142 aaPredicted RBP16.7■□□□□ 0.26
MMP28-204ENST00000615136 FOXG1P55316 489 aaPredicted RBP16.7■□□□□ 0.26
MMP28-204ENST00000615136 CAMK2BQ13554 666 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 C11orf88Q6PI97 169 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 RTN4RL2Q86UN3 420 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 COMMD7Q86VX2 200 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 OR10R2Q8NGX6 335 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 NUDCD2Q8WVJ2 157 aa16.7■□□□□ 0.26
MMP28-204ENST00000615136 NOSIPQ9Y314 301 aaKnown RBP16.7■□□□□ 0.26
MMP28-204ENST00000615136 MUC6Q6W4X9 2439 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CD46P15529 392 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CCL11P51671 97 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 PRSS12P56730 875 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 PMP22Q01453 160 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 DHRS2Q13268 280 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 HLXQ14774 488 aaPredicted RBP16.69■□□□□ 0.26
MMP28-204ENST00000615136 SCGB2B2Q4G0G5 96 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 ZNF766Q5HY98 468 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 SKA3Q8IX90 412 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CHST4Q8NCG5 386 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 SSC4DQ8WTU2 575 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 TMEM45BQ96B21 275 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CYYR1Q96J86 154 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 LPAR5Q9H1C0 372 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CALHM2Q9HA72 323 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 SLC7A10Q9NS82 523 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 KIF25Q9UIL4 384 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 VSIG4Q9Y279 399 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 URB1O60287 2271 aaKnown RBP16.69■□□□□ 0.26
MMP28-204ENST00000615136 FXYD6-FXYD2A0A087WZ82 144 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 RRASP10301 218 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 TBPP20226 339 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 SOX8P57073 446 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 GMFBP60983 142 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 PSG4Q00888 419 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 RAB35Q15286 201 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CLVS2Q5SYC1 327 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 RIPPLY2Q5TAB7 128 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 C9orf135Q5VTT2 229 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 CRIP3Q6Q6R5 217 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 TMUB2Q71RG4 321 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 GVQW1Q8N7I0 195 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 ZDHHC22Q8N966 263 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 HAS2Q92819 552 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 MRGPRFQ96AM1 343 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 FXYD6Q9H0Q3 95 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 KCNN3Q9UGI6 736 aa16.69■□□□□ 0.26
MMP28-204ENST00000615136 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
MMP28-204ENST00000615136 PRRC2CQ9Y520 2896 aaKnown RBP16.68■□□□□ 0.26
MMP28-204ENST00000615136 MRPL33O75394 65 aaKnown RBP16.68■□□□□ 0.26
MMP28-204ENST00000615136 B3GALNT1O75752 331 aa16.68■□□□□ 0.26
MMP28-204ENST00000615136 CHRM2P08172 466 aa16.68■□□□□ 0.26
MMP28-204ENST00000615136 PPP3CBP16298 524 aa16.68■□□□□ 0.26
MMP28-204ENST00000615136 GNB3P16520 340 aa16.68■□□□□ 0.26
MMP28-204ENST00000615136 OR3A4PP47883 348 aa16.68■□□□□ 0.26
MMP28-204ENST00000615136 SRSF4Q08170 494 aaKnown RBP16.68■□□□□ 0.26
MMP28-204ENST00000615136 FDCSPQ8NFU4 85 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms