RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 RORCP51449 518 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 PSMD7P51665 324 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 PPP3R1P63098 170 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 NKX6-1P78426 367 aaPredicted RBP9.81□□□□□ -0.84
SLIRP-212ENST00000613856 MXD1Q05195 221 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 HNRNPA0Q13151 305 aaKnown RBP9.81□□□□□ -0.84
SLIRP-212ENST00000613856 CEP78Q5JTW2 689 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 NR2C2APQ86WQ0 139 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 NKAIN3Q8N8D7 197 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 CSNK2A3Q8NEV1 391 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 OR5D14Q8NGL3 314 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 OR1J1Q8NGS3 322 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 ORAI1Q96D31 301 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 C18orf12Q96KH6 178 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 WFIKKN1Q96NZ8 548 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 TECTBQ96PL2 329 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 BARHL1Q9BZE3 327 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 NXF2Q9GZY0 626 aaKnown RBP9.81□□□□□ -0.84
SLIRP-212ENST00000613856 ZCCHC4Q9H5U6 513 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 NDRG3Q9UGV2 375 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 PIGLQ9Y2B2 252 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 SPEF1Q9Y4P9 236 aa9.81□□□□□ -0.84
SLIRP-212ENST00000613856 A0A075B6Q4 140 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 NOTOA8MTQ0 251 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 SULT1B1O43704 296 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 ERCC1P07992 297 aaPredicted RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 FAM157BP0CG42 384 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 SELEP16581 610 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 RAB3AP20336 220 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 RPS23P62266 143 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 DYNC1I2Q13409 638 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 CLVS2Q5SYC1 327 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 MBNL2Q5VZF2 373 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 SFXN4Q6P4A7 337 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 FTMTQ8N4E7 242 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 NUP37Q8NFH4 326 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 OR1M1Q8NGA1 313 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 OR56B2PQ8NGI1 322 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 SLC25A40Q8TBP6 338 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 UBASH3BQ8TF42 649 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 AP3S1Q92572 193 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 PIGTQ969N2 578 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 KCTD12Q96CX2 325 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 MARS2Q96GW9 593 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 ZC3HAV1LQ96H79 300 aaKnown RBP9.8□□□□□ -0.84
SLIRP-212ENST00000613856 GFI1Q99684 422 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 OR51B6Q9H340 312 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 TMEM138Q9NPI0 162 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 PMF1-BGLAPU3KQ54 211 aa9.8□□□□□ -0.84
SLIRP-212ENST00000613856 A0A1W2PPR1 153 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 DPRXA6NFQ7 191 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 GGT3PA6NGU5 568 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ANXA2P2A6NMY6 339 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 CD300LBA8K4G0 201 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 IQCF6A8MYZ5 107 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ATP6V1G2-DDX39BF2Z307 99 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 AIPO00170 330 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 CST4P01036 141 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ALDOBP05062 364 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 KITLGP21583 273 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 BDKRB2P30411 391 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 GLRXP35754 106 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 OR10A3P58181 314 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 SNTB2Q13425 540 aaKnown RBP9.79□□□□□ -0.84
SLIRP-212ENST00000613856 HLXQ14774 488 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-212ENST00000613856 DEFB113Q30KQ7 82 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ZNF404Q494X3 552 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 NCMAPQ5T1S8 102 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ALKBH2Q6NS38 261 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 LINC00299Q6ZSB3 139 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 CDH26Q8IXH8 852 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 OR5AS1Q8N127 324 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 OR51A2Q8NGJ7 313 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 OR13C9Q8NGT0 318 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-212ENST00000613856 SPSB1Q96BD6 273 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 HAVCR1Q96D42 359 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 SLC30A2Q9BRI3 323 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 OR2J1Q9GZK6 312 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 MMP27Q9H306 513 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 TPK1Q9H3S4 243 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ESRP2Q9H6T0 727 aaKnown RBP9.79□□□□□ -0.84
SLIRP-212ENST00000613856 AK6Q9Y3D8 172 aaKnown RBP9.79□□□□□ -0.84
SLIRP-212ENST00000613856 V9GY05 133 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 ZANQ9Y493 2812 aa9.79□□□□□ -0.84
SLIRP-212ENST00000613856 CUBNO60494 3623 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 IGKV1-9A0A0C4DH69 117 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 TUBAL3A6NHL2 446 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 IFITM5A6NNB3 132 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 A6NNC1 897 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 CLPXO76031 633 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 NCR1O76036 304 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 MAS1P04201 325 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 HEXAP06865 529 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ZNF250P15622 560 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 ATF1P18846 271 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 THBS2P35442 1172 aa9.78□□□□□ -0.84
SLIRP-212ENST00000613856 KIR2DL3P43628 341 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms