RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SHPKQ9UHJ6 478 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 PKDREJQ9NTG1 2253 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 A0A0A6YYJ9 748 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TRIM64A6NGJ6 449 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TSPAN15O95858 294 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SP1P08047 785 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 GALP22466 123 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 CA6P23280 308 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 FUT6P51993 359 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 RPL23AP62750 156 aaKnown RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF658BQ4V348 819 aaPredicted RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 CD276Q5ZPR3 534 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM91Q6ZNR0 172 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 C17orf107Q6ZR85 190 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SHISA5Q8N114 240 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 FAM109AQ8N4B1 249 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 APCDD1LQ8NCL9 501 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SLC30A7Q8NEW0 376 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 OR10J5Q8NHC4 309 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 GUCD1Q96NT3 240 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 ADAM19Q9H013 955 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 RNF32Q9H0A6 362 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 H7C2Y5 167 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SPINT2O43291 252 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 DXOO77932 396 aaKnown RBP6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SELEP16581 610 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 FCGR2CP31995 323 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 PTGER4P35408 488 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 MMP15P51511 669 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SFRP5Q5T4F7 317 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SLC26A10Q8NG04 563 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 FLVCR1-AS1Q8TAF5 88 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 SLAMF9Q96A28 289 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 HES7Q9BYE0 225 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 EGLN1Q9GZT9 426 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 CNTD2Q9H8S5 307 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 MLXQ9UH92 298 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 KLHDC2Q9Y2U9 406 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 THADAQ6YHU6 1953 aa6.45□□□□□ -1.38
CSDE1-218ENST00000610726 TRAV8-7A0A075B6U6 113 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 LRRC30A6NM36 301 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SH2D1BO14796 132 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SSX4O60224 188 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SEMA7AO75326 666 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TPT1P13693 172 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 PTGFRP43088 359 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 NANOS3P60323 173 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 PCOLCEQ15113 449 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 RGS7BPQ6MZT1 257 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CREB3L2Q70SY1 520 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 OR52B4Q8NGK2 314 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SPSB1Q96BD6 273 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SEH1LQ96EE3 360 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ARHGAP5-AS1Q96IT6 56 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 MESP1Q9BRJ9 268 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SF3B5Q9BWJ5 86 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 GON7Q9BXV9 100 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TTTY12Q9BZ98 90 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM272A0A1B0GTI8 110 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 RAB27BO00194 218 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ZNHIT1O43257 154 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SPRY3O43610 288 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 GLSO94925 669 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 THY1P04216 161 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 GSTP1P09211 210 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 RPS4Y1P22090 263 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 OR3A4PP47883 348 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 OR2B11Q5JQS5 317 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 LAIR2Q6ISS4 152 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CCDC28AQ8IWP9 274 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SCCPDHQ8NBX0 429 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 PAQR8Q8TEZ7 354 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 FBXO17Q96EF6 278 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 SDSLQ96GA7 329 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 PLPPR2Q96GM1 343 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 WDFY2Q96P53 400 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 UBL7Q96S82 380 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 RGCCQ9H4X1 137 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM100Q9NV29 134 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 NPAP1Q9NZP6 1156 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF230Q9UIE0 474 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 UPK3AO75631 287 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 AQP8O94778 261 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 COX6A1P12074 109 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 DDOSTP39656 456 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ESPL1Q14674 2120 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CLINT1Q14677 625 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 MSMO1Q15800 293 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TSPO2Q5TGU0 170 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CDCP2Q5VXM1 449 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 DPPA2Q7Z7J5 298 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 LRRTM1Q86UE6 522 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 ZNF808Q8N4W9 903 aaPredicted RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 CISD2Q8N5K1 135 aaKnown RBP6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM251Q8N6I4 163 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 TMEM217Q8N7C4 229 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 RAB39BQ96DA2 213 aa6.44□□□□□ -1.38
CSDE1-218ENST00000610726 AMELYQ99218 206 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms