RNA–Protein interactions for RNA: ENST00000610488.4

PPHLN1-223, Transcript of periphilin 1, human

TSL 5 BASIC

Gene PPHLN1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-223	ENST00000610488	MUCL1	Q96DR8	90 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SOX7	Q9BT81	388 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488	OR10A2	Q9H208	303 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488	PALMD	Q9NP74	551 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ABCA2	Q9BZC7	2435 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488	HIVEP2	P31629	2446 aa		11.67	□□□□□ -0.54
PPHLN1-223	ENST00000610488		A0A0U1RQV5	110 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ZNF503-AS2	A6NEH8	195 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	DPRX	A6NFQ7	191 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488		A6NIN4	97 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	UBL3	O95164	117 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	LCAT	P04180	440 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ZNF20	P17024	532 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	RAB1A	P62820	205 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SNAI3	Q3KNW1	292 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	CNIH2	Q6PI25	160 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	FAM131A	Q6UXB0	335 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	DPPA2	Q7Z7J5	298 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SNX29P2	Q8IUI4	249 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SERPINA12	Q8IW75	414 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SAMD12	Q8N8I0	201 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	CPEB3	Q8NE35	698 aa	Known RBP	11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	OR52H1	Q8NGJ2	320 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	OR5H6	Q8NGV6	325 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ZNF671	Q8TAW3	534 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	NANOS1	Q8WY41	292 aa	Known RBP	11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ADAT3	Q96EY9	351 aa	Predicted RBP	11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	LYZL4	Q96KX0	146 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SP140L	Q9H930	580 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	NOX3	Q9HBY0	568 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ATPIF1	Q9UII2	106 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488		V9GYH0	126 aa		11.66	□□□□□ -0.54
PPHLN1-223	ENST00000610488	CIB4	A0PJX0	185 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	FABP12	A6NFH5	140 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	RNF223	E7ERA6	249 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ABCD4	O14678	606 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	RAD51D	O75771	328 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	IGLV3-1	P01715	115 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ZNF12	P17014	697 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	ELK1	P19419	428 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	TGFBR3	Q03167	851 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	MADCAM1	Q13477	382 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	TBRG1	Q3YBR2	411 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	SEZ6L2	Q6UXD5	910 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	PRIMA1	Q86XR5	153 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	OR51A2	Q8NGJ7	313 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	OR14K1	Q8NGZ2	314 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	LGALS14	Q8TCE9	139 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	USB1	Q9BQ65	265 aa	Known RBP	11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	PLEKHA1	Q9HB21	404 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488	CSPG4	Q6UVK1	2322 aa		11.65	□□□□□ -0.54
PPHLN1-223	ENST00000610488		A0A1W2PR80	420 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TMEM127	O75204	238 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	EIF4E	P06730	217 aa	Known RBP	11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	DANCR	P0C864	163 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	COX5B	P10606	129 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	COX5A	P20674	150 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	EVX1	P49640	407 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CLDN12	P56749	244 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PLP2	Q04941	152 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SPOCK1	Q08629	439 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	GSG1	Q2KHT4	349 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	TIMM23B	Q5SRD1	257 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	GLT8D1	Q68CQ7	371 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	LRRC28	Q86X40	367 aa	Predicted RBP	11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	PLPP7	Q8NBV4	271 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR5D14	Q8NGL3	314 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SGK3	Q96BR1	496 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	LIN7B	Q9HAP6	207 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CISD1	Q9NZ45	108 aa	Known RBP	11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	NPAP1	Q9NZP6	1156 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	EXTL2	Q9UBQ6	330 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	SPATA2	Q9UM82	520 aa		11.65	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CUBN	O60494	3623 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	LOC100509620	A0A075B734	347 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MEGF11	A6BM72	1044 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OVOL3	O00110	214 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	UPK1B	O75841	260 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	DHRS3	O75911	302 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	CCNO	P22674	350 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	AZGP1	P25311	298 aa	Known RBP	11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	STOM	P27105	288 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	BDKRB2	P30411	391 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	DDOST	P39656	456 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF83	P51522	516 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	UBE2N	P61088	152 aa	Known RBP	11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ZNF79	Q15937	498 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MDP1	Q86V88	176 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR1M1	Q8NGA1	313 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR13C9	Q8NGT0	318 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	OR2AE1	Q8NHA4	323 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	REEP6	Q96HR9	211 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	MRI1	Q9BV20	369 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	ABCB10	Q9NRK6	738 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	FAIM	Q9NVQ4	179 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	B3GNT2	Q9NY97	397 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	STEAP1	Q9UHE8	339 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488	POU2F3	Q9UKI9	436 aa		11.64	□□□□□ -0.55
PPHLN1-223	ENST00000610488		V9GYS6	101 aa		11.64	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms