RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 DCTN5Q9BTE1 182 aa12.21□□□□□ -0.45
CTSA-216ENST00000607212 ARMC1Q9NVT9 282 aa12.21□□□□□ -0.45
CTSA-216ENST00000607212 SLC25A10Q9UBX3 287 aaPredicted RBP12.21□□□□□ -0.45
CTSA-216ENST00000607212 BAIAP2Q9UQB8 552 aa12.21□□□□□ -0.45
CTSA-216ENST00000607212 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
CTSA-216ENST00000607212 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
CTSA-216ENST00000607212 hCG_38984A0A1B0GV85 526 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 ZNF850A8MQ14 1090 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 RNASEK-C17orf49H0YIS7 233 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 TFF1P04155 84 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 GABRA5P31644 462 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 SAA4P35542 130 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 CAPZA1P52907 286 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 SLC25A1P53007 311 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 PPP1R8Q12972 351 aaKnown RBP12.2□□□□□ -0.46
CTSA-216ENST00000607212 LY6EQ16553 131 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 NCR3LG1Q68D85 454 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 CYP2R1Q6VVX0 501 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 PGAM4Q8N0Y7 254 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 LY6G5BQ8NDX9 201 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 PIGCQ92535 297 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 HIST1H2AAQ96QV6 131 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 DDOQ99489 341 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 MYLK2Q9H1R3 596 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 HAO2Q9NYQ3 351 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 CD300AQ9UGN4 299 aa12.2□□□□□ -0.46
CTSA-216ENST00000607212 H0YAE9 185 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 H3BUX3 64 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 AKR7A2O43488 359 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 ANGPTL7O43827 346 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 GSTT1P30711 240 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 PRDX4Q13162 271 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 TEX30Q5JUR7 227 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 STUMQ69YW2 141 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 SLC35E4Q6ICL7 350 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 METAP1DQ6UB28 335 aaPredicted RBP12.19□□□□□ -0.46
CTSA-216ENST00000607212 C16orf89Q6UX73 402 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 FAM185AQ8N0U4 392 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 GALNT4Q8N4A0 578 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 C11orf44Q8N8P7 122 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 OR51G2Q8NGK0 314 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 OR4Q3Q8NH05 313 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 TEX47Q8TBZ9 253 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 MED30Q96HR3 178 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 RNF170Q96K19 258 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 CLPTM1LQ96KA5 538 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 ABHD6Q9BV23 337 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 WDR13Q9H1Z4 485 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 MED20Q9H944 212 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 ABCB9Q9NP78 766 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 U3KQV3 271 aa12.19□□□□□ -0.46
CTSA-216ENST00000607212 FAM183AA6NL82 134 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 TMEM210A6NLX4 147 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 H3BN98 237 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 TSPAN9O75954 239 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 GLRA1P23415 457 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 HERPUD1Q15011 391 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 ZSCAN26Q16670 478 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 SHFQ7M4L6 423 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 COMMD2Q86X83 199 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 DEFB107AQ8IZN7 70 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 PAPD5Q8NDF8 572 aaKnown RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 OR4C13Q8NGP0 309 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 OR10Z1Q8NGY1 313 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 THEM6Q8WUY1 208 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 RAB3IPQ96QF0 476 aaPredicted RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 FAM234AQ9H0X4 552 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 OR51V1Q9H2C8 321 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 REEP1Q9H902 201 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 ELL3Q9HB65 397 aaPredicted RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 NLKQ9UBE8 527 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 SAMHD1Q9Y3Z3 626 aaKnown RBP12.18□□□□□ -0.46
CTSA-216ENST00000607212 MPC1Q9Y5U8 109 aa12.18□□□□□ -0.46
CTSA-216ENST00000607212 PAICSP22234 425 aaKnown RBP12.17□□□□□ -0.46
CTSA-216ENST00000607212 TGM4P49221 684 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 UBE2E1P51965 193 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 C1orf122Q6ZSJ8 110 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 ZDHHC23Q8IYP9 409 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 IQCF1Q8N6M8 205 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 Q8N7P7 452 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 RNF133Q8WVZ7 376 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 ITPKCQ96DU7 683 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
CTSA-216ENST00000607212 DMRTB1Q96MA1 342 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 GAFA1Q96PS6 74 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 SSX3Q99909 188 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 DNTTIP1Q9H147 329 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 RGCCQ9H4X1 137 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 METTL8Q9H825 291 aaKnown RBP12.17□□□□□ -0.46
CTSA-216ENST00000607212 NDE1Q9NXR1 346 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 TAGLN3Q9UI15 199 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 SIGLEC9Q9Y336 463 aa12.17□□□□□ -0.46
CTSA-216ENST00000607212 VWFP04275 2813 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms