RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 TRABDQ9H4I3 376 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 WDR55Q9H6Y2 383 aaPredicted RBP3.65□□□□□ -1.83
LINC00397-202ENST00000606785 RPF2Q9H7B2 306 aaKnown RBP3.65□□□□□ -1.83
LINC00397-202ENST00000606785 FBXO8Q9NRD0 319 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 AGPAT4Q9NRZ5 378 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 USE1Q9NZ43 259 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 ADA2Q9NZK5 511 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 VAPAQ9P0L0 249 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 OPN4Q9UHM6 478 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 ASB4Q9Y574 426 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 MRPS18BQ9Y676 258 aaKnown RBP3.65□□□□□ -1.83
LINC00397-202ENST00000606785 AK9Q5TCS8 1911 aa3.65□□□□□ -1.83
LINC00397-202ENST00000606785 WRNQ14191 1432 aaPredicted RBP eCLIP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 A0A1B0GW55 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 A0A1W2PQL4 384 aaPredicted RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 H3BNH8 94 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SMLR1H3BR10 107 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SGCEO43556 437 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 FAM189A1O60320 539 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 FKBP6O75344 327 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SRP72O76094 671 aaKnown RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 AIFM1O95831 613 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 C6orf47O95873 294 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 PPBPP02775 128 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 NBEAP1P0C6P0 100 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L2P0CJ85 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L3P0CJ86 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L4P0CJ87 422 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L5P0CJ88 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L6P0CJ89 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L7P0CJ90 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CT45A6P0DMU7 189 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CT45A5P0DMU8 189 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CT45A7P0DMV0 189 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 TDGF1P13385 188 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CCR7P32248 378 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 NBL1P41271 181 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 MAGEA3P43357 314 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 TDGF1P3P51864 188 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 FGF8P55075 233 aaPredicted RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 RPS15AP62244 130 aaKnown RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 RPS21P63220 83 aaKnown RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 PITPNAQ00169 270 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 STX4Q12846 297 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 TRIP13Q15645 432 aaPredicted RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SLC1A5Q15758 541 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 C5orf47Q569G3 176 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 LRRC10Q5BKY1 277 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CT45A1Q5HYN5 189 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 PAGE3Q5JUK9 113 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 ULK3Q6PHR2 472 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4L9Q6RFH8 374 aaPredicted RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 MBOAT1Q6ZNC8 495 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM179Q6ZVK1 233 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 NECAP1Q8NC96 275 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 OR4F15Q8NGB8 312 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 OR51L1Q8NGJ5 315 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 OR2A1Q8NGT9 310 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 CT45A3Q8NHU0 189 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 STOML3Q8TAV4 291 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 PIH1D2Q8WWB5 315 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 GEMIN6Q8WXD5 167 aaKnown RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 HGDQ93099 445 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SERPINB11Q96P15 392 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 PFDN5Q99471 154 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 NIPSNAP1Q9BPW8 284 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DDA1Q9BW61 102 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 SRRQ9GZT4 340 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 ABCB9Q9NP78 766 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 KCNJ16Q9NPI9 418 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DUX4Q9UBX2 424 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 RCL1Q9Y2P8 373 aaKnown RBP3.64□□□□□ -1.83
LINC00397-202ENST00000606785 ALG5Q9Y673 324 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 URGCP-MRPS24S4R325 110 aa3.64□□□□□ -1.83
LINC00397-202ENST00000606785 DHX57Q6P158 1386 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 COL22A1Q8NFW1 1626 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 NCOA1Q15788 1441 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 MAGI1Q96QZ7 1491 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 VPS37CA5D8V6 355 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 SMKR1H3BMG3 65 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 KPNA3O00505 521 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ARPC5O15511 151 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ICOSLGO75144 302 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 ZMPSTE24O75844 475 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 DCTN3O75935 186 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 UTS2O95399 124 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 BRI3O95415 125 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 LSM8O95777 96 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 HBE1P02100 147 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 IGHV3-43DP0DP04 118 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 CD1EP15812 388 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 HLA-DMAP28067 261 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 RBMXP38159 391 aaKnown RBP3.63□□□□□ -1.83
LINC00397-202ENST00000606785 RGS6P49758 472 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 TMEM33P57088 247 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 MLF1P58340 268 aa3.63□□□□□ -1.83
LINC00397-202ENST00000606785 DSCR10P59022 87 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms