RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SMIM15Q7Z3B0 74 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 NUFIP2Q7Z417 695 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TAF8Q7Z7C8 310 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 LRRTM4Q86VH4 590 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 LYPD6Q86Y78 171 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 THNSL2Q86YJ6 484 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MAML2Q8IZL2 1156 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 BCL6BQ8N143 479 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 JAGN1Q8N5M9 183 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 FAM71E2Q8N5Q1 922 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 COX18Q8N8Q8 333 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SUMF2Q8NBJ7 301 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PLPP5Q8NEB5 264 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR4S1Q8NGB4 309 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR51D1Q8NGF3 324 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR56B2PQ8NGI1 322 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR1N1Q8NGS0 311 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR9A1PQ8NGU1 263 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR1P1Q8NH06 330 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR51F2Q8NH61 342 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR14C36Q8NHC7 312 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM255BQ8WV15 326 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZNF480Q8WV37 535 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OVCA2Q8WZ82 227 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SUSD6Q92537 303 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CORO2AQ92828 525 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TMEM18Q96B42 140 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 BPIFA2Q96DR5 249 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 DTD2Q96FN9 168 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 OR7D2Q96RA2 312 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SLC22A12Q96S37 553 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 INTS14Q96SY0 518 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PDCD1LG2Q9BQ51 273 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ATG101Q9BSB4 218 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 URM1Q9BTM9 101 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SUCNR1Q9BXA5 334 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MS4A8Q9BY19 250 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 EIF5A2Q9GZV4 153 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 GLIPR2Q9H4G4 154 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MED20Q9H944 212 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 SYNPO2LQ9H987 977 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 GPR173Q9NS66 373 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZCCHC3Q9NUD5 404 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 KIAA1456Q9P272 454 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 CPA4Q9UI42 421 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 TUBD1Q9UJT1 453 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 RAB22AQ9UL26 194 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 PIN4Q9Y237 131 aaKnown RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 NTNG1Q9Y2I2 539 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 MED31Q9Y3C7 131 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 YIPF1Q9Y548 306 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 HS3ST3B1Q9Y662 390 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 ZFP37Q9Y6Q3 630 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 VWA8A3KMH1 1905 aa3.59□□□□□ -1.83
HMGB1P50-201ENST00000605814 BPTFQ12830 3046 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 HEATR5BQ9P2D3 2071 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 A0A0A6YYD5 115 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TRBV11-1A0A0K0K1C0 115 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CLEC18AA5D8T8 446 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 PROB1E7EW31 1015 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 K7EPK0 472 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 K7N7A8 449 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CCSO14618 274 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ALOX12BO75342 701 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 STK17BO94768 372 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 NDUFB2O95178 105 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 C1orf105O95561 183 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SNAI1O95863 264 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TXNDC12O95881 172 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TBX6O95947 436 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TOMM40O96008 361 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TYMSP04818 313 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 HMGN2P05204 90 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 DBIP07108 87 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ASGR1P07306 291 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 PFN1P07737 140 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 MMP3P08254 477 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SLC35G6P0C7Q6 338 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 IRF1P10914 325 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ERGP11308 486 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 FGF5P12034 268 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ZNF708P17019 499 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 RPS12P25398 132 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 HOXC8P31273 242 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 FCGR2CP31995 323 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GALNSP34059 522 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 THPOP40225 353 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 TSFMP43897 325 aaKnown RBP3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 CSNK1A1P48729 337 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 GATMP50440 423 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 EFNB2P52799 333 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 UBE2KP61086 200 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 RHOAP61586 193 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ARF6P62330 175 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 ADAM8P78325 824 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 HLA-DRB3P79483 266 aa3.58□□□□□ -1.84
HMGB1P50-201ENST00000605814 SP3Q02447 781 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms