RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SHANK1Q9Y566 2161 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 C5orf51A6NDU8 294 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MFSD2BA6NFX1 497 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MFNGO00587 321 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 YKT6O15498 198 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CXCL13O43927 109 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 VAMP5O95183 116 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 IL2RAP01589 272 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CYC1P08574 325 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 B4GALT1P15291 398 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ACKR3P25106 362 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CTSSP25774 331 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 RFC3P40938 356 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 DUSP3P51452 185 aaPredicted RBP10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 B3GALT5-AS1P59052 145 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SLC9A3R2Q15599 337 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SMUG1Q53HV7 270 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 WIPI1Q5MNZ9 446 aaPredicted RBP10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ZNF774Q6NX45 483 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 C1orf210Q8IVY1 113 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SLC38A6Q8IZM9 456 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 OR56B1Q8NGI3 324 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SGK3Q96BR1 496 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 NAA11Q9BSU3 229 aaPredicted RBP10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GPR173Q9NS66 373 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 DEPPQ9NTK1 212 aa10.33□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MPTX1A8MV57 137 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ANGPTL7O43827 346 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SCGNO76038 276 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 IGLV3-1P01715 115 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 IGHV3-9P01782 118 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GSTP1P09211 210 aaKnown RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GSK3AP49840 483 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 LUMP51884 338 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CARD18P57730 90 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 RPS27AP62979 156 aaKnown RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 TRA2AQ13595 282 aaKnown RBP eCLIP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 C6orf201Q7Z4U5 140 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 OR5M9Q8NGP3 310 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 OR1S1Q8NH92 325 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 VRK1Q99986 396 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 URM1Q9BTM9 101 aaKnown RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 TCFL5Q9UL49 500 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 PADI1Q9ULC6 663 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 RNF222A6NCQ9 220 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 C19orf67A6NJJ6 358 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 P04436 131 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 AMY2BP19961 511 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GABRR1P24046 479 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MPZP25189 248 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SERPINF1P36955 418 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ARPC4P59998 168 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CHAF1BQ13112 559 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 JMJD6Q6NYC1 403 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ESX1Q8N693 406 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ST8SIA2Q92186 375 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 TMEM230Q96A57 120 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 HDHD3Q9BSH5 251 aaPredicted RBP10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 MBD2Q9UBB5 411 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 TNFSF18Q9UNG2 199 aa10.32□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 IGKV1D-8A0A087WSZ0 117 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 PINLYPA6NC86 204 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SIGLEC5O15389 551 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ADAP1O75689 374 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ZNF205O95201 554 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 PRF1P14222 555 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 OTX1P32242 354 aaPredicted RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SNU13P55769 128 aaKnown RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CLDN15P56746 228 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SIGLEC14Q08ET2 396 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 C20orf196Q8IYI0 205 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 BHLHE23Q8NDY6 225 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 FGFBP3Q8TAT2 258 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ZNF845Q96IR2 970 aaPredicted RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 FLVCR1Q9Y5Y0 555 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 EP300Q09472 2414 aaPredicted RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 A0A0U1RQV5 110 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 DUS4LO95620 317 aaKnown RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 HPNP05981 417 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 NR2C1P13056 603 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GLRA1P23415 457 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 DLSTP36957 453 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 RGS19P49795 217 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 ZNF84P51523 738 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 RAC3P60763 192 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 FGL1Q08830 312 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 NKAPLQ5M9Q1 402 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 SPINK14Q6IE38 97 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GALNTL5Q7Z4T8 443 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 GGNQ86UU5 652 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 BOLLQ8N9W6 283 aaKnown RBP10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 CSNK2A3Q8NEV1 391 aa10.31□□□□□ -0.76
HMGN3-AS1-201ENST00000604516 OR5H2Q8NGV7 314 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms