RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 BPIFB2Q8N4F0 458 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 CPEB3Q8NE35 698 aaKnown RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 RAB3CQ96E17 227 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 COL25A1Q9BXS0 654 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF436Q9C0F3 470 aaPredicted RBP13.13□□□□□ -0.31
CCDC12-211ENST00000604367 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 MGAT4CQ9UBM8 478 aa13.13□□□□□ -0.31
CCDC12-211ENST00000604367 LOC100509620A0A075B734 347 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 SCGNO76038 276 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 TOXO94900 526 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 PLATP00750 562 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 HLA-HP01893 362 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 CHRM2P08172 466 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 TMEM178AQ8NBL3 297 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 PRSS33Q8NF86 280 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 OR11H4Q8NGC9 324 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 GRPEL2Q8TAA5 225 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 S100A13Q99584 98 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 IFT46Q9NQC8 304 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-211ENST00000604367 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 FBXO9Q9UK97 447 aaPredicted RBP13.12□□□□□ -0.31
CCDC12-211ENST00000604367 MGAT4AQ9UM21 535 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 FRYQ5TBA9 3013 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 TRGV5A0A0B4J1U4 118 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 ACTL6AO96019 429 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 CCL2P13500 99 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 TNFSF10P50591 281 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
CCDC12-211ENST00000604367 NUBP1P53384 320 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 RIPPLY1Q0D2K3 151 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 NUFIP2Q7Z417 695 aaKnown RBP13.12□□□□□ -0.31
CCDC12-211ENST00000604367 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 NAXEQ8NCW5 288 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 OR51T1Q8NGJ9 327 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 LINC00470Q9BZP3 86 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 CST11Q9H112 138 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 BCO1Q9HAY6 547 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 DLL4Q9NR61 685 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 CA10Q9NS85 328 aa13.12□□□□□ -0.31
CCDC12-211ENST00000604367 FAM230AA0A1W2PPH8 454 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 SSX5O60225 188 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 IL5P05113 134 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 MELTFP08582 738 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 MTCP1P56278 107 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 TMEM50BP56557 158 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 GNG2P59768 71 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 BCL2A1Q16548 175 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 Q6ZSR3 168 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 SLC36A1Q7Z2H8 476 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF100Q8IYN0 542 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 OR2T35Q8NGX2 323 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF431Q8TF32 576 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ARHGAP5-AS1Q96IT6 56 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 URM1Q9BTM9 101 aaKnown RBP13.11□□□□□ -0.31
CCDC12-211ENST00000604367 POFUT1Q9H488 388 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 RANBP3Q9H6Z4 567 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-211ENST00000604367 CD74P04233 296 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 UBBP0CG47 229 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 MGMTP16455 207 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF92Q03936 586 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 KRTAP27-1Q3LI81 207 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
CCDC12-211ENST00000604367 NLRC3Q7RTR2 1065 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 C10orf35Q96D05 121 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 MED30Q96HR3 178 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 ZNF724A8MTY0 619 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 HIST1H1DP16402 221 aaKnown RBP13.1□□□□□ -0.31
CCDC12-211ENST00000604367 HRH1P35367 487 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 GSK3AP49840 483 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 SOX8P57073 446 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 RNPS1Q15287 305 aaKnown RBP13.1□□□□□ -0.31
CCDC12-211ENST00000604367 MUC20Q8N307 709 aaPredicted RBP13.1□□□□□ -0.31
CCDC12-211ENST00000604367 C9orf62Q8N4C0 152 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 OR56B1Q8NGI3 324 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 WDYHV1Q96HA8 205 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 TRAF4Q9BUZ4 470 aaPredicted RBP13.1□□□□□ -0.31
CCDC12-211ENST00000604367 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 TMEM82A0PJX8 343 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 UBE2QL1A1L167 161 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 SNRPGP15A8MWD9 76 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 ANGPTL7O43827 346 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 TSC22D2O75157 780 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 RAD51DO75771 328 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 TMEM225BP0DP42 221 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 CD79AP11912 226 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 EDN3P14138 238 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 CPN1P15169 458 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 DNASE1P24855 282 aa13.1□□□□□ -0.31
CCDC12-211ENST00000604367 RPS27AP62979 156 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms