RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 TMEM165Q9HC07 324 aa16.26■□□□□ 0.19
UPF1-212ENST00000601689 INPP5EQ9NRR6 644 aa16.26■□□□□ 0.19
UPF1-212ENST00000601689 OR5V1Q9UGF6 321 aa16.26■□□□□ 0.19
UPF1-212ENST00000601689 PIGLQ9Y2B2 252 aa16.26■□□□□ 0.19
UPF1-212ENST00000601689 NAV3Q8IVL0 2385 aa16.26■□□□□ 0.19
UPF1-212ENST00000601689 DHRS7CA6NNS2 312 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 CEACAM18A8MTB9 384 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 E9PQ18 207 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 MAGEB4O15481 346 aaPredicted RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 ZNF205O95201 554 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 TTRP02766 147 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 RPSAP08865 295 aaKnown RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 DBTP11182 482 aaKnown RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 ACKR3P25106 362 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 PMELP40967 661 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 MFGE8Q08431 387 aaPredicted RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 RAB40BQ12829 278 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 MED21Q13503 144 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 SSX6Q7RTT6 188 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 EGFL6Q8IUX8 553 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 ITPKCQ96DU7 683 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 SSBP3Q9BWW4 388 aaPredicted RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 G6PC2Q9NQR9 355 aa16.25■□□□□ 0.19
UPF1-212ENST00000601689 EXOGQ9Y2C4 368 aaKnown RBP16.25■□□□□ 0.19
UPF1-212ENST00000601689 WNK2Q9Y3S1 2297 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 PPIAL4CA0A0B4J2A2 164 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 OOEPA6NGQ2 149 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ERICH4A6NGS2 130 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 OR5B21A6NL26 309 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 PRR32B1ATL7 298 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 H0YHG0 523 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 LGALS8O00214 317 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 SYT7O43581 403 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 SERPINA3P01011 423 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 NRASP01111 189 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 UBCP0CG48 685 aaKnown RBP16.24■□□□□ 0.19
UPF1-212ENST00000601689 PEX2P28328 305 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 NPY4RP50391 375 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 GNG3P63215 75 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 LCN2P80188 198 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ZNF91Q05481 1191 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ZNF154Q13106 437 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 IL18R1Q13478 541 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 MICBQ29980 383 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 CEACAM21Q3KPI0 293 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ZNF684Q5T5D7 378 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 PLCXD3Q63HM9 321 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 MOB3CQ70IA8 216 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 DEFB108BQ8NET1 73 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 OR5A2Q8NGI9 324 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ZNF671Q8TAW3 534 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 HAVCR2Q8TDQ0 301 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 OR5P3Q8WZ94 311 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 TMEM246Q9BRR3 403 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 ERVK-18Q9QC07 812 aa16.24■□□□□ 0.19
UPF1-212ENST00000601689 P2RY10O00398 339 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 SRSF10O75494 262 aaKnown RBP16.23■□□□□ 0.19
UPF1-212ENST00000601689 IGLV3-1P01715 115 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 HTR1AP08908 422 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 WNT2P09544 360 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 GABRB1P18505 474 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 ZNF85Q03923 595 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 MRPL28Q13084 256 aaKnown RBP16.23■□□□□ 0.19
UPF1-212ENST00000601689 CDONQ4KMG0 1287 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 TP53I3Q53FA7 332 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 CLVS2Q5SYC1 327 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 TMEM244Q5VVB8 128 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 BTNL3Q6UXE8 466 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 CATSPERDQ86XM0 798 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 LRRC29Q8WV35 223 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 RORBQ92753 470 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 LGALS12Q96DT0 336 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 CLN8Q9UBY8 286 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 SLC22A13Q9Y226 551 aa16.23■□□□□ 0.19
UPF1-212ENST00000601689 ABCA2Q9BZC7 2435 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 C3orf80F5H4A9 247 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 J3QLW9 94 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 DLGAP1O14490 977 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 CDIPTO14735 213 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 MUC1P15941 1255 aaPredicted RBP16.22■□□□□ 0.19
UPF1-212ENST00000601689 FAHP16930 419 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 ZNF19P17023 458 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 GALEQ14376 348 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 ODF4Q2M2E3 257 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 CEP78Q5JTW2 689 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 ZNF691Q5VV52 312 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 SFRP4Q6FHJ7 346 aaPredicted RBP16.22■□□□□ 0.19
UPF1-212ENST00000601689 KRT74Q7RTS7 529 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 OR10Z1Q8NGY1 313 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 PPP1R14AQ96A00 147 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 C10orf35Q96D05 121 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 TECTBQ96PL2 329 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 MRI1Q9BV20 369 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 ALG8Q9BVK2 526 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 CHCHD3Q9NX63 227 aaKnown RBP16.22■□□□□ 0.19
UPF1-212ENST00000601689 DNAJB11Q9UBS4 358 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 SLC7A11Q9UPY5 501 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 HSPE1-MOB4S4R3N1 261 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 V9GYS6 101 aa16.22■□□□□ 0.19
UPF1-212ENST00000601689 ZNF732B4DXR9 585 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms