RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 TRAV34A0A0B4J273 112 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PHOSPHO2Q8TCD6 241 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 CHST6Q9GZX3 395 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 SLC17A4Q9Y2C5 497 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF835Q9Y2P0 537 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 HAND1O96004 215 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 LYSMD4Q5XG99 296 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 NXPE3Q969Y0 559 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 LOC107986453A0A1B0GWG9 222 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 OR2T8A6NH00 312 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF749O43361 778 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ARR3P36575 388 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 SULT1A1P50225 295 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PLP1P60201 277 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 OR10A7Q8NGE5 316 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PRO1933Q9H354 126 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 NAT8Q9UHE5 227 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 M0QZ24 198 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 CRYBA1P05813 215 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PGA4P0DJD7 388 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PGA5P0DJD9 388 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 GABRA1P14867 456 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PRDX1Q06830 199 aaKnown RBP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF252P-AS1Q0IIN9 211 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 CD300LDQ6UXZ3 194 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 USP53Q70EK8 1073 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 SLAMF8Q9P0V8 285 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 PPP1R3CQ9UQK1 317 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 STARD4Q96DR4 205 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 LCORQ96JN0 433 aaPredicted RBP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 MMACHCQ9Y4U1 282 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 NID1P14543 1247 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 CD82P27701 267 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 RHOBP62745 196 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 HOXC5Q00444 222 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 OR8G1Q15617 311 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 WDTC1Q8N5D0 677 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 GALMQ96C23 342 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 HS3ST1O14792 307 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ABOP16442 354 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 SRSF9Q13242 221 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF813Q6ZN06 617 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 MRPL13Q9BYD1 178 aaKnown RBP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 IL21Q9HBE4 155 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 TAS2R4Q9NYW5 299 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 OPN4Q9UHM6 478 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 SIGLEC5O15389 551 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 UTS2O95399 124 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 COX6CP09669 75 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 RPL27P61353 136 aaKnown RBP11.1□□□□□ -0.63
SHANK2-218ENST00000601538 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 CSF3RQ99062 836 aa11.1□□□□□ -0.63
SHANK2-218ENST00000601538 ISLRO14498 428 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 LINC00614P0C842 121 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 LIMK1P53667 647 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF480Q8WV37 535 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 C20orf27Q9GZN8 174 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 CMC2Q9NRP2 79 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 SPNP16150 400 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 RELQ04864 619 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 SLC16A13Q7RTY0 426 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 ASB16Q96NS5 453 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 FAM206AQ9NX38 181 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 OBP2AQ9NY56 170 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 DOCK7Q96N67 2140 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 BCL3P20749 454 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 CDX1P47902 265 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 NKAIN2Q5VXU1 208 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 OR1L1Q8NH94 360 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 NRXN3Q9Y4C0 1643 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 A0A1B0GWA3 101 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 MAP1LC3B2A6NCE7 125 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 FIGNL2A6NMB9 653 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 RHBDL1O75783 438 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 PIAS2O75928 621 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 ERVFRD-1P60508 538 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 PAFAH1B2P68402 229 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 SURF2Q15527 256 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 OR1C1Q15619 314 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 RTN4IP1Q8WWV3 396 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 MAP1LC3BQ9GZQ8 125 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 BANF2Q9H503 90 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF737O75373 536 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 FPR2P25090 351 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 SMIM21Q3B7S5 101 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 C9orf152Q5JTZ5 239 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 ZNF468Q5VIY5 522 aaPredicted RBP11.09□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM64Q6YI46 380 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 CHST2Q9Y4C5 530 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
SHANK2-218ENST00000601538 TMEM189-UBE2V1I3L0A0 370 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms