RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 DPPA5A6NC42 116 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 CD5LO43866 347 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 TIMM8AO60220 97 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 GPX5O75715 221 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 TMBIM6P55061 237 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 PRSS12P56730 875 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 PPP3R1P63098 170 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 FAM3AP98173 230 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 RIPPLY1Q0D2K3 151 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 TNK1Q13470 666 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 OR8B8Q15620 311 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 ZBTB37Q5TC79 503 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 MBNL2Q5VZF2 373 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 C22orf42Q6IC83 251 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 TMEM91Q6ZNR0 172 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 SLC16A12Q6ZSM3 486 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 MAPK1IP1LQ8NDC0 245 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 OR56B2PQ8NGI1 322 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 OR14K1Q8NGZ2 314 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 SYNPRQ8TBG9 265 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 KLF14Q8TD94 323 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 RPL3LQ92901 407 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 C10orf35Q96D05 121 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 CMBLQ96DG6 245 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 MARS2Q96GW9 593 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 KCTD7Q96MP8 289 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 BCL7BQ9BQE9 202 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 NAA50Q9GZZ1 169 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 SLITRK2Q9H156 845 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF442Q9H7R0 627 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF275Q9NSD4 429 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 TXNL4BQ9NX01 149 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 CMAHPQ9Y471 501 aa10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 RAI1Q7Z5J4 1906 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF816-ZNF321PA0A0X1KG74 233 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 A0A1W2PPK0 400 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 A0A1W2PPW3 197 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 ANKRD30BLA7E2S9 258 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 CD300LBA8K4G0 201 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 SHISA9B4DS77 424 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 LMX1BO60663 402 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 SC5DO75845 299 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 UCHL1P09936 223 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 OCMP0CE72 109 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FAHP16930 419 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 CALRP27797 417 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FGF9P31371 208 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 THBS4P35443 961 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 MPV17P39210 176 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 DDOSTP39656 456 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 PTH2RP49190 550 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FABP6P51161 128 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 KLF3P57682 345 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 LSM3P62310 102 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 INSL4Q14641 139 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 PDLIM3Q53GG5 364 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 OR2T2Q6IF00 324 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 Q6ZSR3 168 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 SERPINA12Q8IW75 414 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 BHLHE23Q8NDY6 225 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 OR5D14Q8NGL3 314 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 TMEM171Q8WVE6 324 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 PP6455Q8WZ26 134 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FGGYQ96C11 551 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 ISOC1Q96CN7 298 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 HAVCR1Q96D42 359 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 SOX7Q9BT81 388 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 CENPOQ9BU64 300 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 PAPOLGQ9BWT3 736 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FAM192AQ9GZU8 254 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 TCF7L1Q9HCS4 588 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 NOX4Q9NPH5 578 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 RSL24D1Q9UHA3 163 aaKnown RBP10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 FZR1Q9UM11 496 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 CEPT1Q9Y6K0 416 aa10.3□□□□□ -0.76
SHKBP1-213ENST00000597325 DYSFO75923 2080 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 TRBV5-7A0A0A0MS05 114 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 A0A0G2JK05 382 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ANKRD61A6NGH8 418 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 SLC22A1O15245 554 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 SIAH2O43255 324 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF250P15622 560 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 PAX1P15863 534 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 FSTP19883 344 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ACKR3P25106 362 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 THBS2P35442 1172 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 MAGEB1P43366 347 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 SRSF2Q01130 221 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 PSG7Q13046 419 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 MOGQ16653 247 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ZNF672Q499Z4 452 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 CLVS2Q5SYC1 327 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 UNQ9370/PRO34162Q6UXP9 181 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 OR5AS1Q8N127 324 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 PARP16Q8N5Y8 322 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 IGFBPL1Q8WX77 278 aa10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 MRPL24Q96A35 216 aaKnown RBP10.29□□□□□ -0.76
SHKBP1-213ENST00000597325 ADAT3Q96EY9 351 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms