RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 V9GYS6 101 aa9.33□□□□□ -0.92
VRK3-210ENST00000596121 LRRC30A6NM36 301 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 TRAPPC2LH3BP13 241 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.32□□□□□ -0.92
VRK3-210ENST00000596121 MPZL2O60487 215 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 IGHA1P01876 353 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 CCL1P22362 96 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 MAP2K3P46734 347 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 LCN2P80188 198 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 FAM76BQ5HYJ3 339 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 CEP78Q5JTW2 689 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 SFRP4Q6FHJ7 346 aaPredicted RBP9.32□□□□□ -0.92
VRK3-210ENST00000596121 WDR82Q6UXN9 313 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 LHFPL3Q86UP9 236 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 GLCCI1Q86VQ1 547 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 ACBD7Q8N6N7 88 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 ZNF555Q8NEP9 628 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 SEMA6DQ8NFY4 1073 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 OR11L1Q8NGX0 322 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 OR8S1Q8NH09 359 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 OR51F2Q8NH61 342 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 CYGBQ8WWM9 190 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 RPL3LQ92901 407 aaKnown RBP9.32□□□□□ -0.92
VRK3-210ENST00000596121 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 TLNRD1Q9H1K6 362 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 MOB1AQ9H8S9 216 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 MMP26Q9NRE1 261 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 C14orf119Q9NWQ9 140 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 GNG8Q9UK08 70 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 PIGLQ9Y2B2 252 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
VRK3-210ENST00000596121 MPC1Q9Y5U8 109 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 ATRQ13535 2644 aa9.32□□□□□ -0.92
VRK3-210ENST00000596121 IGHV3OR15-7A0A075B7D8 119 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.31□□□□□ -0.92
VRK3-210ENST00000596121 ZNF816-ZNF321PA0A0X1KG74 233 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 DAPL1A0PJW8 107 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 A6NLC8 198 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 E9PI62 339 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 CDIPTO14735 213 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 PHF1O43189 567 aaPredicted RBP9.31□□□□□ -0.92
VRK3-210ENST00000596121 DHRS3O75911 302 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 FSTL3O95633 263 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 LIMS3P0CW19 117 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 LIMS4P0CW20 117 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 GNALP38405 381 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ACTC1P68032 377 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ACTA1P68133 377 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 IL5RAQ01344 420 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 PAX2Q02962 417 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 SLC34A1Q06495 639 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 RIPPLY1Q0D2K3 151 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 CHRFAM7AQ494W8 412 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 TMEM42Q69YG0 159 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 MOB3CQ70IA8 216 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 COMMD2Q86X83 199 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ZDHHC23Q8IYP9 409 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 KLHL36Q8N4N3 616 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 DHRSXQ8N5I4 330 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 SPICQ8N5J4 248 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 SCCPDHQ8NBX0 429 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 OR2G2Q8NGZ5 317 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 PELI1Q96FA3 418 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 RNF170Q96K19 258 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 MICU1Q9BPX6 476 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ADI1Q9BV57 179 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 BEX2Q9BXY8 128 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 TMPRSS13Q9BYE2 586 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 SHARPINQ9H0F6 387 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 GPR173Q9NS66 373 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 ERVK13-1Q9NX77 482 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 FRRS1LQ9P0K9 344 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 CTSZQ9UBR2 303 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 CDC42EP3Q9UKI2 254 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 PCDHB10Q9UN67 800 aa9.31□□□□□ -0.92
VRK3-210ENST00000596121 TRAV20A0A0B4J274 112 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 A0A1B0GW55 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 ZNF732B4DXR9 585 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 J3QLW9 94 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 LGALS8O00214 317 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 RHBDL1O75783 438 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 TFF1P04155 84 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L2P0CJ85 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L3P0CJ86 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L4P0CJ87 422 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L5P0CJ88 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L6P0CJ89 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 DUX4L7P0CJ90 424 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 IRF2P14316 349 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 ATP6V1B1P15313 513 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 ZNF19P17023 458 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 AMY2BP19961 511 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 CAPGP40121 348 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 GPM6AP51674 278 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 RAB40BQ12829 278 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 GALEQ14376 348 aa9.3□□□□□ -0.92
VRK3-210ENST00000596121 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms