RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 TMEM127O75204 238 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ALX3O95076 343 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 NRASP01111 189 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ALDOBP05062 364 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 HCKP08631 526 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 RAC2P15153 192 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ADRA2CP18825 462 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ACKR3P25106 362 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 GCH1P30793 250 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 S100A5P33763 92 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 RANBP1P43487 201 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 PRSS12P56730 875 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 LSAMPQ13449 338 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 TNK1Q13470 666 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 SNTB1Q13884 538 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 HES5Q5TA89 166 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ASPHD2Q6ICH7 369 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 FTMTQ8N4E7 242 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 NKAIN3Q8N8D7 197 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 DNAAF1Q8NEP3 725 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 OR56B2PQ8NGI1 322 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 PIGTQ969N2 578 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 KCTD12Q96CX2 325 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 HAVCR1Q96D42 359 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 SLC30A2Q9BRI3 323 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 NXF2Q9GZY0 626 aaKnown RBP11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 PLGRKTQ9HBL7 147 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 GPR173Q9NS66 373 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 ABRACLQ9P1F3 81 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 SLC7A11Q9UPY5 501 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 PEX16Q9Y5Y5 336 aa11.22□□□□□ -0.61
SHKBP1-209ENST00000595803 TUBAL3A6NHL2 446 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 IFITM5A6NNB3 132 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 VSTM5A8MXK1 200 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 GMDSO60547 372 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 CST4P01036 141 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 SLC2A2P11168 524 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 PRKACBP22694 351 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 GLRXP35754 106 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 FABP6P51161 128 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 BMXP51813 675 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ERVS71-1P61550 626 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 CNN3Q15417 329 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 UBE2V2Q15819 145 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 DDI2Q5TDH0 399 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 OR2T2Q6IF00 324 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 RGS7BPQ6MZT1 257 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF529Q6P280 563 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 SEZ6L2Q6UXD5 910 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 NR2C2APQ86WQ0 139 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 CDH26Q8IXH8 852 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 PIAS4Q8N2W9 510 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 JAGN1Q8N5M9 183 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 OR51A2Q8NGJ7 313 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF671Q8TAW3 534 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 MARS2Q96GW9 593 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 CEP19Q96LK0 163 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 TECTBQ96PL2 329 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 GFI1Q99684 422 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 CHST5Q9GZS9 411 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ESRP2Q9H6T0 727 aaKnown RBP11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 COMMD3Q9UBI1 195 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 RHBDD3Q9Y3P4 386 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ATP23Q9Y6H3 246 aa11.21□□□□□ -0.61
SHKBP1-209ENST00000595803 ZNF850A8MQ14 1090 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 CTDSP2O14595 271 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 RGS5O15539 181 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 ZNF93P35789 620 aaPredicted RBP11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 ART1P52961 327 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 RPS23P62266 143 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 DYNC1I2Q13409 638 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 SNTB2Q13425 540 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 RAB11BQ15907 218 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 SLC22A25Q6T423 547 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 OR5AS1Q8N127 324 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 OR52N4Q8NGI2 321 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 OR6Q1Q8NGQ2 317 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 TBC1D15Q8TC07 691 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 GPER1Q99527 375 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 MRI1Q9BV20 369 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 PAPOLGQ9BWT3 736 aaKnown RBP11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 SMURF1Q9HCE7 757 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 CMAHPQ9Y471 501 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 MPC1Q9Y5U8 109 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 ACANP16112 2415 aa11.2□□□□□ -0.62
SHKBP1-209ENST00000595803 MAP1AP78559 2803 aaPredicted RBP11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 IGKV1-9A0A0C4DH69 117 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 FAM230AA0A1W2PPH8 454 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 ATP6V1G2-DDX39BF2Z307 99 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 AIPO00170 330 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 ABCD4O14678 606 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 CD37P11049 281 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 AZGP1P25311 298 aaKnown RBP11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 HTR2CP28335 458 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 MPV17P39210 176 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 PEX19P40855 299 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 FUT6P51993 359 aa11.19□□□□□ -0.62
SHKBP1-209ENST00000595803 ATP1B3P54709 279 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms