RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 LOC107986453A0A1B0GWG9 222 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 LRRC30A6NM36 301 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 OR4C45A6NMZ5 311 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 DHRS7CA6NNS2 312 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 PTBP3O95758 552 aaKnown RBP12.11□□□□□ -0.47
LIG1-208ENST00000595758 ISG15P05161 165 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 CCDC159P0C7I6 412 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 ZNF12P17014 697 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 C21orf33P30042 268 aaPredicted RBP12.11□□□□□ -0.47
LIG1-208ENST00000595758 RBMXP38159 391 aaKnown RBP12.11□□□□□ -0.47
LIG1-208ENST00000595758 PMELP40967 661 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 TGM4P49221 684 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 CHN2P52757 468 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 MPPED2Q15777 294 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 BIVMQ86UB2 503 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 ZNF676Q8N7Q3 588 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 OR11L1Q8NGX0 322 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 OR52N1Q8NH53 320 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 HPS1Q92902 700 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 MYDGFQ969H8 173 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 ITPKCQ96DU7 683 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 RTL8AQ9BWD3 113 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 Q9H521 79 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 BABAM2Q9NXR7 383 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 TPRKBQ9Y3C4 175 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
LIG1-208ENST00000595758 LRP5LA4QPB2 252 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 A6NLC8 198 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 NRASP01111 189 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 CDK1P06493 297 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 IRF2P14316 349 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
LIG1-208ENST00000595758 CDH15P55291 814 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 ZNF181Q2M3W8 571 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 CCDC58Q4VC31 144 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 CLVS2Q5SYC1 327 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 RPL22L1Q6P5R6 122 aaKnown RBP12.1□□□□□ -0.47
LIG1-208ENST00000595758 MOB3CQ70IA8 216 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 OR1M1Q8NGA1 313 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 Q8TCH9 128 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 GATAD2BQ8WXI9 593 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 RNF170Q96K19 258 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 SMR3AQ99954 134 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 RASSF4Q9H2L5 321 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 NARFLQ9H6Q4 476 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 PLEKHA1Q9HB21 404 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 HHLA2Q9UM44 414 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 MTORP42345 2549 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 ZANQ9Y493 2812 aa12.1□□□□□ -0.47
LIG1-208ENST00000595758 TRBV2A0A0J9YWF9 115 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 ISPDA4D126 451 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 A6NIN4 97 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 TMEM212A6NML5 194 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 WNT9BO14905 357 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 ZFPL1O95159 310 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 CYB5R3P00387 301 aaPredicted RBP12.09□□□□□ -0.47
LIG1-208ENST00000595758 RPSAP08865 295 aaKnown RBP12.09□□□□□ -0.47
LIG1-208ENST00000595758 THBS2P35442 1172 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 TMEM249Q2WGJ8 235 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 PLCXD3Q63HM9 321 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 TMEM42Q69YG0 159 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 WDR86Q86TI4 376 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 C1orf87Q8N0U7 546 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 OR5A2Q8NGI9 324 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 OR5AK2Q8NH90 309 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 COMMD4Q9H0A8 199 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 ERVK-18Q9QC07 812 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 RNF7Q9UBF6 113 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 ERGIC3Q9Y282 383 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 PCDHGB5Q9Y5G0 923 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
LIG1-208ENST00000595758 ZNF469Q96JG9 3925 aaPredicted RBP12.08□□□□□ -0.47
LIG1-208ENST00000595758 CR1P17927 2039 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 hCG_1807616A0A1W2PRN6 198 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ANKRD61A6NGH8 418 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 MYL12BO14950 172 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 DENRO43583 198 aaKnown RBP12.08□□□□□ -0.48
LIG1-208ENST00000595758 LMX1BO60663 402 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 LY6G6DO95868 133 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 SERPINA3P01011 423 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 GPM6AP51674 278 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 BTG1P62324 171 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 GNG3P63215 75 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 SLC35A2P78381 396 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ZNF154Q13106 437 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 RNLSQ5VYX0 342 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 XAF1Q6GPH4 301 aa12.08□□□□□ -0.48
LIG1-208ENST00000595758 CLEC9AQ6UXN8 241 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms