RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 ECDO95905 644 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 IGLV3-1P01715 115 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 H2AFB2P0C5Z0 115 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 COX5BP10606 129 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 CCL2P13500 99 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 BMP5P22003 454 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 CCL1P22362 96 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 STOMP27105 288 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 POU3F4P49335 361 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 MAB21L1Q13394 359 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 CDK10Q15131 360 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 FCN2Q15485 313 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 ZNF474Q6S9Z5 364 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 C1orf162Q8NEQ5 155 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 OR52H1Q8NGJ2 320 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 MS4A3Q96HJ5 214 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 FAM71F1Q96KD3 344 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 LYZL4Q96KX0 146 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 ZNF75AQ96N20 296 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 BEX1Q9HBH7 125 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 ZNF275Q9NSD4 429 aaPredicted RBP11.47□□□□□ -0.57
VRK3-205ENST00000593919 NKIRAS2Q9NYR9 191 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 Q9UFV3 132 aa11.47□□□□□ -0.57
VRK3-205ENST00000593919 C5orf49A4QMS7 147 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 LCATP04180 440 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 CCNOP22674 350 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 AP3S2P59780 193 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 UBE2NP61088 152 aaKnown RBP11.46□□□□□ -0.58
VRK3-205ENST00000593919 PLP2Q04941 152 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 P2RY6Q15077 328 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 TMEM255AQ5JRV8 349 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 ST6GALNAC3Q8NDV1 305 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 OR1J2Q8NGS2 313 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 OR2AE1Q8NHA4 323 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 C17orf50Q8WW18 174 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 GIMAP1Q8WWP7 306 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 PHF21AQ96BD5 680 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 FAM3DQ96BQ1 224 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 BOD1Q96IK1 185 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 C20orf85Q9H1P6 137 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 OR10A2Q9H208 303 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 GHITMQ9H3K2 345 aa11.46□□□□□ -0.58
VRK3-205ENST00000593919 ESPL1Q14674 2120 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 C7orf66A4D0T2 115 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 FAM172BPA6NC97 362 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 SLC17A2O00624 439 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 CTAG2O75638 210 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 FSTP19883 344 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 HOXC12P31275 282 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 OPRM1P35372 400 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 SCAND1P57086 179 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 MRPS10P82664 201 aaKnown RBP11.45□□□□□ -0.58
VRK3-205ENST00000593919 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 FAAP20Q6NZ36 180 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 DOK3Q7L591 496 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 CCDC36Q8IYA8 594 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 SLC7A5P1Q8MH63 180 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 FGGYQ96C11 551 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 ADAT3Q96EY9 351 aaPredicted RBP11.45□□□□□ -0.58
VRK3-205ENST00000593919 POM121L2Q96KW2 1035 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 TMEM246Q9BRR3 403 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 C1QTNF5Q9BXJ0 243 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 OR51J1Q9H342 316 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 CGGBP1Q9UFW8 167 aaPredicted RBP11.45□□□□□ -0.58
VRK3-205ENST00000593919 CFAP46Q8IYW2 2715 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 CADP27708 2225 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 EPG5Q9HCE0 2579 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 LOC100289279A0A1B0GTE1 492 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 ANKRD20A5PA0PJZ0 165 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 EEF1E1-BLOC1S5C9J1V9 151 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 RGS13O14921 159 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 XRCC3O43542 346 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 KDM4BO94953 1096 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 C1QBP02746 253 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
VRK3-205ENST00000593919 MNDAP41218 407 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 SPOCK1Q08629 439 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 GLT8D1Q68CQ7 371 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 MYPOPQ86VE0 399 aaPredicted RBP11.45□□□□□ -0.58
VRK3-205ENST00000593919 BEST4Q8NFU0 473 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 OR51A2Q8NGJ7 313 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 SGK3Q96BR1 496 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 FLVCR2Q9UPI3 526 aa11.45□□□□□ -0.58
VRK3-205ENST00000593919 HIVEP3Q5T1R4 2406 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 TMEM272A0A1B0GTI8 110 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 GGT3PA6NGU5 568 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 MSTNO14793 375 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 DHRS3O75911 302 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 SERPINA5P05154 406 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 CELA3BP08861 270 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 HOXB1P14653 301 aaPredicted RBP11.44□□□□□ -0.58
VRK3-205ENST00000593919 ZNF14P17017 642 aaPredicted RBP11.44□□□□□ -0.58
VRK3-205ENST00000593919 CFPP27918 469 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 APLNRP35414 380 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 COLCA1Q6ZS62 124 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 BHLHA15Q7RTS1 189 aaPredicted RBP11.44□□□□□ -0.58
VRK3-205ENST00000593919 BIVMQ86UB2 503 aa11.44□□□□□ -0.58
VRK3-205ENST00000593919 C17orf78Q8N4C9 275 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms