RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 HOXB6P17509 224 aaKnown RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 GSK3AP49840 483 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 CSNK2BP67870 215 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 HOXA4Q00056 320 aaPredicted RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 PPP1R8Q12972 351 aaKnown RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 BLMHQ13867 455 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 LINC01590Q5TEZ4 76 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 METAP1DQ6UB28 335 aaPredicted RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 WDR82Q6UXN9 313 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 CD300LDQ6UXZ3 194 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 TIGD4Q8IY51 512 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 GALNT4Q8N4A0 578 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 FAM81AQ8TBF8 368 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 GIPC3Q8TF64 312 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 H1FXQ92522 213 aaKnown RBP8.37□□□□□ -1.07
VMP1-214ENST00000592106 UBE2FQ969M7 185 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 HIST1H2AAQ96QV6 131 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 CCL13Q99616 98 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 RASSF4Q9H2L5 321 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 MMP27Q9H306 513 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 ZNF556Q9HAH1 456 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 RNF114Q9Y508 228 aa8.37□□□□□ -1.07
VMP1-214ENST00000592106 A0A0U1RQK1 487 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 C5orf63A6NC05 138 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 FAM183AA6NL82 134 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 B2RBV5 119 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 CDIPTO14735 213 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 PRODHO43272 600 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 KCNAB3O43448 404 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 CST1P01037 141 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 RAP2AP10114 183 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 ANOS1P23352 680 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 OPRL1P41146 370 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 IER3P46695 156 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 DEFA6Q01524 100 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 PRDX4Q13162 271 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 IKZF1Q13422 519 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 TRIM25Q14258 630 aaKnown RBP8.36□□□□□ -1.07
VMP1-214ENST00000592106 MIDNQ504T8 468 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 PDLIM3Q53GG5 364 aaPredicted RBP8.36□□□□□ -1.07
VMP1-214ENST00000592106 NCR3LG1Q68D85 454 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 STUMQ69YW2 141 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 PIGWQ7Z7B1 504 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 WDR86Q86TI4 376 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 ZDHHC23Q8IYP9 409 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 FAM216BQ8N7L0 139 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 OTOSQ8NHW6 89 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 THEM6Q8WUY1 208 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 EDARADDQ8WWZ3 215 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 TAF15Q92804 592 aaKnown RBP eCLIP8.36□□□□□ -1.07
VMP1-214ENST00000592106 ITFG2Q969R8 447 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 SGK3Q96BR1 496 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 MED30Q96HR3 178 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 CITED1Q99966 193 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 TLNRD1Q9H1K6 362 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 OR51V1Q9H2C8 321 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 SIRT7Q9NRC8 400 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 HAO2Q9NYQ3 351 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 ZNRD1Q9P1U0 126 aa8.36□□□□□ -1.07
VMP1-214ENST00000592106 A0A1W2PQ09 198 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 ACOT8O14734 319 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 E2F6O75461 281 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 CST4P01036 141 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 HMGN1P05114 100 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 CALB2P22676 271 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 POU1F1P28069 291 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 RPS7P62081 194 aaKnown RBP8.35□□□□□ -1.07
VMP1-214ENST00000592106 KLHL12Q53G59 568 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 SLC35D3Q5M8T2 416 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 ATPAF1Q5TC12 328 aaPredicted RBP8.35□□□□□ -1.07
VMP1-214ENST00000592106 KRT77Q7Z794 578 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 COMMD2Q86X83 199 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 PDZD9Q8IXQ8 264 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 IQCF1Q8N6M8 205 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 LY6G5BQ8NDX9 201 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 OR5R1Q8NH85 324 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 C8orf46Q8TAG6 207 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 PIGCQ92535 297 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 ASB9Q96DX5 294 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 NSL1Q96IY1 281 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 RNF170Q96K19 258 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 RAB3IPQ96QF0 476 aaPredicted RBP8.35□□□□□ -1.07
VMP1-214ENST00000592106 FEVQ99581 238 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 PKP2Q99959 881 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 NIPSNAP1Q9BPW8 284 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 DCTN5Q9BTE1 182 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 MED20Q9H944 212 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 VNN3Q9NY84 501 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 SLC25A10Q9UBX3 287 aaPredicted RBP8.35□□□□□ -1.07
VMP1-214ENST00000592106 LAMP5Q9UJQ1 280 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 VPREB3Q9UKI3 123 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 RHBDD3Q9Y3P4 386 aa8.35□□□□□ -1.07
VMP1-214ENST00000592106 ZNF816-ZNF321PA0A0X1KG74 233 aa8.34□□□□□ -1.07
VMP1-214ENST00000592106 A0A1W2PPH5 198 aa8.34□□□□□ -1.07
VMP1-214ENST00000592106 ZNF850A8MQ14 1090 aa8.34□□□□□ -1.07
VMP1-214ENST00000592106 M0R1W7 72 aa8.34□□□□□ -1.07
VMP1-214ENST00000592106 NPFFO15130 113 aa8.34□□□□□ -1.07
VMP1-214ENST00000592106 SELENOFO60613 162 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms