RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 HAS2Q92819 552 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 ARHGAP5-AS1Q96IT6 56 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 CDC6Q99741 560 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 CST11Q9H112 138 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 WNT5BQ9H1J7 359 aa13.76□□□□□ -0.21
MBD1-227ENST00000592060 IGKV3D-15A0A087WSY6 115 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 OR6C65A6NJZ3 312 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 OR2AT4A6NND4 320 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 HMSDA8MTL9 139 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 FCGR2AP12318 317 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 ZBTB25P24278 435 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 RFC3P40938 356 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 OR1C1Q15619 314 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 PDSS1Q5T2R2 415 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 HES3Q5TGS1 186 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.75□□□□□ -0.21
MBD1-227ENST00000592060 OR2AE1Q8NHA4 323 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 AKR7LQ8NHP1 331 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 FGFBP3Q8TAT2 258 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 PIGTQ969N2 578 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 TM2D1Q9BX74 207 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 FAM117AQ9C073 453 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 CLEC4MQ9H2X3 399 aaPredicted RBP13.75□□□□□ -0.21
MBD1-227ENST00000592060 ABI3Q9P2A4 366 aa13.75□□□□□ -0.21
MBD1-227ENST00000592060 M0R233 179 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 SNAPC5O75971 98 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 CFDP00746 253 aaPredicted RBP13.74□□□□□ -0.21
MBD1-227ENST00000592060 IL2RAP01589 272 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 ZNF806P0C7X5 589 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 PATE4P0C8F1 98 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 MGMTP16455 207 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
MBD1-227ENST00000592060 CLDN18P56856 261 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 SEC61A1P61619 476 aaKnown RBP13.74□□□□□ -0.21
MBD1-227ENST00000592060 PSG4Q00888 419 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 MICBQ29980 383 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 SULF2Q8IWU5 870 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 SEMA6DQ8NFY4 1073 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 REEP6Q96HR9 211 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 OCSTAMPQ9BR26 566 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 OR2H1Q9GZK4 316 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 FN3KRPQ9HA64 309 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 B4GALT7Q9UBV7 327 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 IL17BQ9UHF5 180 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 MYO7BQ6PIF6 2116 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 RPS10-NUDT3A0A1W2PQS6 291 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 LINC00862A6NCI5 91 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 L7N2F9 121 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 IFNA7P01567 189 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 PMP2P02689 132 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 ITGA3P26006 1051 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 HTR5AP47898 357 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 STEAP2Q8NFT2 490 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 OR51T1Q8NGJ9 327 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 OR4K15Q8NH41 348 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 TTTY12Q9BZ98 90 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 TMEM9BQ9NQ34 198 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 GPR173Q9NS66 373 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 TIMM10BQ9Y5J6 103 aa13.74□□□□□ -0.21
MBD1-227ENST00000592060 CNTRLQ7Z7A1 2325 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
MBD1-227ENST00000592060 LIPCP11150 499 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 C4BPBP20851 252 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 SRSF4Q08170 494 aaKnown RBP13.73□□□□□ -0.21
MBD1-227ENST00000592060 AIMP2Q13155 320 aaKnown RBP13.73□□□□□ -0.21
MBD1-227ENST00000592060 ACTBL2Q562R1 376 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 VAX1Q5SQQ9 334 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 LYG2Q86SG7 212 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 SKA3Q8IX90 412 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 OR5M8Q8NGP6 311 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 OR10K1Q8NGX5 313 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 IRF2BPLQ9H1B7 796 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 PLA2G3Q9NZ20 509 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 AUP1Q9Y679 476 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 WDFY4Q6ZS81 3184 aa13.73□□□□□ -0.21
MBD1-227ENST00000592060 NOS1APO75052 506 aaPredicted RBP13.72□□□□□ -0.21
MBD1-227ENST00000592060 TNFSF15O95150 251 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
MBD1-227ENST00000592060 ZNF708P17019 499 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 SERPINA2P20848 420 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 CD34P28906 385 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 CBX5P45973 191 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 PCBD1P61457 104 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 PPP1R1AQ13522 171 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 GK2Q14410 553 aaPredicted RBP13.72□□□□□ -0.21
MBD1-227ENST00000592060 TSPO2Q5TGU0 170 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 FAHD2BQ6P2I3 314 aaPredicted RBP13.72□□□□□ -0.21
MBD1-227ENST00000592060 HOGA1Q86XE5 327 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 OR8H3Q8N146 312 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 ST8SIA4Q92187 359 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 FBXW5Q969U6 566 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 SPSB1Q96BD6 273 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 FAHD2AQ96GK7 314 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 LINC00470Q9BZP3 86 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 SLC6A15Q9H2J7 730 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 UBQLN2Q9UHD9 624 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 RTTNQ86VV8 2226 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 LOC100509620A0A075B734 347 aa13.72□□□□□ -0.21
MBD1-227ENST00000592060 TRAV14DV4A0A0A6YYC5 116 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms