RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TMEM244Q5VVB8 128 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 AHSA2Q719I0 299 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 STX19Q8N4C7 294 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 CCDC54Q8NEL0 328 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 RNF166Q96A37 237 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-212ENST00000590096 ITPKCQ96DU7 683 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 GSX1Q9H4S2 264 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-212ENST00000590096 PLEKHA1Q9HB21 404 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 DCAF16Q9NXF7 216 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 FRRS1LQ9P0K9 344 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 PSORS1C1Q9UIG5 152 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 V9GYS6 101 aa17.97■□□□□ 0.47
ATG4D-212ENST00000590096 LOC100289279A0A1B0GTE1 492 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 A6NLC8 198 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 TMEM178BH3BS89 294 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 H3BSH0 61 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 PTBP3O95758 552 aaKnown RBP17.96■□□□□ 0.47
ATG4D-212ENST00000590096 LY6G6DO95868 133 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 ZNF12P17014 697 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 HNRNPA0Q13151 305 aaKnown RBP17.96■□□□□ 0.47
ATG4D-212ENST00000590096 MPPED2Q15777 294 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 C6orf141Q5SZD1 244 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 OR14K1Q8NGZ2 314 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 Q8TCH9 128 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 PPP1R3EQ9H7J1 279 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 SCN3BQ9NY72 215 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 RAB26Q9ULW5 256 aa17.96■□□□□ 0.47
ATG4D-212ENST00000590096 LOC107986453A0A1B0GWG9 222 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 CYB5R3P00387 301 aaPredicted RBP17.95■□□□□ 0.46
ATG4D-212ENST00000590096 GZMKP49863 264 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 CDH15P55291 814 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 NANOS3P60323 173 aaKnown RBP17.95■□□□□ 0.46
ATG4D-212ENST00000590096 PLCXD3Q63HM9 321 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 Q6ZSR3 168 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 KCTD8Q6ZWB6 473 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 KRT74Q7RTS7 529 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 CLDND2Q8NHS1 167 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 OR5P3Q8WZ94 311 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 GAL3ST1Q99999 423 aa17.95■□□□□ 0.46
ATG4D-212ENST00000590096 TMEM210A6NLX4 147 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 SLC1A7O00341 560 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 WNT9BO14905 357 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 NRASP01111 189 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 CCDC159P0C7I6 412 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 PMELP40967 661 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 TGM4P49221 684 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 BTG1P62324 171 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 CEP78Q5JTW2 689 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 CLVS2Q5SYC1 327 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 OR2G6Q5TZ20 316 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 MOB3CQ70IA8 216 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 RDH10Q8IZV5 341 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF676Q8N7Q3 588 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 OR1M1Q8NGA1 313 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 RNF170Q96K19 258 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 CNBD2Q96M20 576 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 C1orf123Q9NWV4 160 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 RNF7Q9UBF6 113 aa17.94■□□□□ 0.46
ATG4D-212ENST00000590096 CSPG4Q6UVK1 2322 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 hCG_1807616A0A1W2PRN6 198 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 IGHV2-70P01814 119 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 ISG15P05161 165 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 RPSAP08865 295 aaKnown RBP17.93■□□□□ 0.46
ATG4D-212ENST00000590096 RBMXP38159 391 aaKnown RBP17.93■□□□□ 0.46
ATG4D-212ENST00000590096 CEACAM21Q3KPI0 293 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 CYB5R2Q6BCY4 276 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 OR52N1Q8NH53 320 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 HPSE2Q8WWQ2 592 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 MYDGFQ969H8 173 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 RAB39BQ96DA2 213 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF184Q99676 751 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-212ENST00000590096 COMMD4Q9H0A8 199 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 FKBP14Q9NWM8 211 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 UBAP1Q9NZ09 502 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 CLEC2DQ9UHP7 191 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 HHLA2Q9UM44 414 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 TPRKBQ9Y3C4 175 aa17.93■□□□□ 0.46
ATG4D-212ENST00000590096 YLPM1P49750 1951 aaKnown RBP17.93■□□□□ 0.46
ATG4D-212ENST00000590096 ABCA1O95477 2261 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 ZANQ9Y493 2812 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 A6NIN4 97 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 TMEM212A6NML5 194 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 OR4C45A6NMZ5 311 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 E9PI62 339 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 MYL12BO14950 172 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 CD5LO43866 347 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 IGHV4-31P0DP07 118 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 IL2RGP31785 369 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 THBS2P35442 1172 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 MDH2P40926 338 aaKnown RBP17.92■□□□□ 0.46
ATG4D-212ENST00000590096 GPM6AP51674 278 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 ZNF154Q13106 437 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 CCDC58Q4VC31 144 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 RPL22L1Q6P5R6 122 aaKnown RBP17.92■□□□□ 0.46
ATG4D-212ENST00000590096 WDR86Q86TI4 376 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 MUC20Q8N307 709 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-212ENST00000590096 SPICQ8N5J4 248 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 OR5A2Q8NGI9 324 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 OR5AK2Q8NH90 309 aa17.92■□□□□ 0.46
ATG4D-212ENST00000590096 C10orf35Q96D05 121 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms