RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 MTCP1P56278 107 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 MRPL49Q13405 166 aaKnown RBP17.15■□□□□ 0.34
TRIM47-204ENST00000587339 GPR176Q14439 515 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 ZBTB37Q5TC79 503 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 RAB12Q6IQ22 244 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 OR2W3Q7Z3T1 314 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 KCNG3Q8TAE7 436 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 ITPKCQ96DU7 683 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 CPNE2Q96FN4 548 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-204ENST00000587339 MMP28Q9H239 520 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 OPA3Q9H6K4 179 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 PTTG3PQ9NZH4 202 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 GHRLQ9UBU3 117 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 KCNN3Q9UGI6 736 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 RBMX2Q9Y388 322 aaKnown RBP17.15■□□□□ 0.34
TRIM47-204ENST00000587339 MEIOCA2RUB1 952 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 CELA3BP08861 270 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 HLXQ14774 488 aaPredicted RBP17.15■□□□□ 0.34
TRIM47-204ENST00000587339 C17orf78Q8N4C9 275 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 ACBD4Q8NC06 268 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 OR5L1Q8NGL2 311 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 UBASH3BQ8TF42 649 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 TNFAIP8L1Q8WVP5 186 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 PIGCQ92535 297 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 S100A13Q99584 98 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 ASF1BQ9NVP2 202 aa17.15■□□□□ 0.34
TRIM47-204ENST00000587339 FAM230AA0A1W2PPH8 454 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 ECDO95905 644 aaPredicted RBP17.14■□□□□ 0.33
TRIM47-204ENST00000587339 CEACAM8P31997 349 aaPredicted RBP17.14■□□□□ 0.33
TRIM47-204ENST00000587339 ALDH3B1P43353 468 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 MOGAT2Q3SYC2 334 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 PLET1Q6UQ28 207 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 DNM1P46Q6ZS02 220 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 MYPOPQ86VE0 399 aaPredicted RBP17.14■□□□□ 0.33
TRIM47-204ENST00000587339 DOLPP1Q86YN1 238 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 CADM3Q8N126 398 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 TMEM104Q8NE00 496 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 DUSP18Q8NEJ0 188 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 OR56B2PQ8NGI1 322 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 BORCS8Q96FH0 119 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 TECTBQ96PL2 329 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 SFXN3Q9BWM7 321 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 NLKQ9UBE8 527 aa17.14■□□□□ 0.33
TRIM47-204ENST00000587339 SCGNO76038 276 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 NAT2P11245 290 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 PRSS3P35030 304 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 RBP2P50120 134 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 AP3S2P59780 193 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 DYRK1AQ13627 763 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 KLF9Q13886 244 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 SLC22A6Q4U2R8 563 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 PRR30Q53SZ7 412 aaPredicted RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 FTMTQ8N4E7 242 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 WDR31Q8NA23 367 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 CST11Q9H112 138 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 OR51B6Q9H340 312 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 CDH20Q9HBT6 801 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 EIF3KQ9UBQ5 218 aaKnown RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 SLC7A11Q9UPY5 501 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 MAP1BP46821 2468 aaKnown RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 RAB27BO00194 218 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 MPIG6BO95866 241 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 FAM157BP0CG42 384 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 GLI4P10075 376 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 CBR1P16152 277 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 SLC6A1P30531 599 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 SNTB2Q13425 540 aaKnown RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 PLCXD3Q63HM9 321 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 LHFPL2Q6ZUX7 228 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 RFPL4BQ6ZWI9 263 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 MOB3CQ70IA8 216 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 C1QL2Q7Z5L3 287 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 PAPOLGQ9BWT3 736 aaKnown RBP17.13■□□□□ 0.33
TRIM47-204ENST00000587339 TMEM59Q9BXS4 323 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 ING4Q9UNL4 249 aa17.13■□□□□ 0.33
TRIM47-204ENST00000587339 INTS1Q8N201 2190 aaKnown RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 J3QW42 95 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 CDC14BO60729 498 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 CRTAPO75718 401 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 RBBP9O75884 186 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 IGKV3-15P01624 115 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 GSTT2BP0CG30 244 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 VEGFCP49767 419 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 FUT6P51993 359 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 FAM189A2Q15884 450 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 BHLHA15Q7RTS1 189 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 C7orf50Q9BRJ6 194 aaKnown RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 C1QTNF6Q9BXI9 259 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 POFUT1Q9H488 388 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 BANF2Q9H503 90 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 ZMAT3Q9HA38 289 aaKnown RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 OBP2BQ9NPH6 170 aa17.12■□□□□ 0.33
TRIM47-204ENST00000587339 MRPL15Q9P015 296 aaKnown RBP17.12■□□□□ 0.33
TRIM47-204ENST00000587339 A0A1W2PP11 408 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 ZNF850A8MQ14 1090 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 H7C417 338 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 AGFG2O95081 481 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 SLC34A2O95436 690 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 TMEM225BP0DP42 221 aa17.11■□□□□ 0.33
TRIM47-204ENST00000587339 UNQ6494/PRO21346Q6UXR6 183 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms