RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSNK1D-224ENST00000584672 V9GYY5 206 aaPredicted RBP11.34□□□□□ -0.59
CSNK1D-224ENST00000584672 DNAH7Q8WXX0 4024 aa11.34□□□□□ -0.59
CSNK1D-224ENST00000584672 TVP23AA6NH52 213 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 OR2AT4A6NND4 320 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 VGLL3A8MV65 326 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 F2RL2O00254 374 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 RENP00797 406 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 ACAA1P09110 424 aaPredicted RBP11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 KDELR2P33947 212 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 SLC7A2P52569 658 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 GFOD2Q3B7J2 385 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 LYPD4Q6UWN0 246 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 DRAM2Q6UX65 266 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 KCTD8Q6ZWB6 473 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 SLC16A9Q7RTY1 509 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 C7orf26Q96N11 449 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 PRR25Q96S07 402 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 RABEP2Q9H5N1 569 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 NLKQ9UBE8 527 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 TMEM5Q9Y2B1 443 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 RHBDD3Q9Y3P4 386 aa11.33□□□□□ -0.6
CSNK1D-224ENST00000584672 H0YHG0 523 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 TIPRLO75663 272 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 TXNDC12O95881 172 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 ARG1P05089 322 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 OTX1P32242 354 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 PYCR1P32322 319 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 SELENOWP63302 87 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 DGCR2P98153 550 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 FAM3AP98173 230 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 IL5RAQ01344 420 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 CYLC2Q14093 348 aaPredicted RBP11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 TAF13Q15543 124 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 TIGD6Q17RP2 521 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 LDLRAD2Q5SZI1 272 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 AGBL2Q5U5Z8 902 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 DPY19L2P2Q6ZN68 376 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 LINC00471Q8N535 108 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 OR4M1Q8NGD0 313 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 LYSTQ99698 3801 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 TLNRD1Q9H1K6 362 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 PALMDQ9NP74 551 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
CSNK1D-224ENST00000584672 IGKV1D-17A0A075B6S4 117 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 UNC119BA6NIH7 251 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 FAM90A8PA6NJQ4 464 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 SH2D7A6NKC9 451 aaPredicted RBP11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 XRCC2O43543 280 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 ZNF682O95780 498 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 HIST1H1CP16403 213 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 ZNF823P16415 610 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 GLRA1P23415 457 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 DDOSTP39656 456 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 FGD3Q5JSP0 725 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 DCXRQ7Z4W1 244 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 ZDHHC21Q8IVQ6 265 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 C11orf42Q8N5U0 333 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 OR5K1Q8NHB7 308 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 REEP6Q96HR9 211 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 MICU1Q9BPX6 476 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 OPA3Q9H6K4 179 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 YY1AP1Q9H869 796 aa11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 GMPR2Q9P2T1 348 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 HUWE1Q7Z6Z7 4374 aaKnown RBP11.31□□□□□ -0.6
CSNK1D-224ENST00000584672 OR6C68A6NDL8 312 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ANXA2P2A6NMY6 339 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 FXYD1O00168 92 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 RHBDL1O75783 438 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 LPLP06858 475 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ANXA2P07355 339 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 PSG2P11465 335 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 PIPP12273 146 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 LYL1P12980 280 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 SLC25A1P53007 311 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 RPL31P62899 125 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ZNF273Q14593 569 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 TMEM200BQ69YZ2 307 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ZFAND6Q6FIF0 208 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 C18orf65Q6ZTR6 163 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ZBTB46Q86UZ6 589 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 OR10Z1Q8NGY1 313 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 FANK1Q8TC84 345 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 FOXRED1Q96CU9 486 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 RTL8AQ9BWD3 113 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 FGF23Q9GZV9 251 aaPredicted RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 SP140LQ9H930 580 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 LSM4Q9Y4Z0 139 aaKnown RBP11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 HILPDAQ9Y5L2 63 aa11.3□□□□□ -0.6
CSNK1D-224ENST00000584672 ZNF850A8MQ14 1090 aa11.29□□□□□ -0.6
CSNK1D-224ENST00000584672 SPARCP09486 303 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms