RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ZNF816-ZNF321PA0A0X1KG74 233 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 LOC110117498-PIK3R3F6TDL0 507 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 CDIPTO14735 213 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 HTR1FP30939 366 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 ATP6V1E1P36543 226 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 NPY4RP50391 375 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 CDC42P60953 191 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 MFGE8Q08431 387 aaPredicted RBP17.01■□□□□ 0.31
SS18-224ENST00000584083 WDR82Q6UXN9 313 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 ZNF841Q6ZN19 808 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 THAP5Q7Z6K1 395 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 FAM90A1Q86YD7 464 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 PPP1R14AQ96A00 147 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 TBX5Q99593 518 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 NUDT16L1Q9BRJ7 211 aaKnown RBP17.01■□□□□ 0.31
SS18-224ENST00000584083 IMPAD1Q9NX62 359 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 CTSZQ9UBR2 303 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 NUFIP1Q9UHK0 495 aaKnown RBP17.01■□□□□ 0.31
SS18-224ENST00000584083 NUP50Q9UKX7 468 aa17.01■□□□□ 0.31
SS18-224ENST00000584083 KIR2DS1A0A191URI9 304 aa17■□□□□ 0.31
SS18-224ENST00000584083 TMEM210A6NLX4 147 aa17■□□□□ 0.31
SS18-224ENST00000584083 EI24O14681 340 aa17■□□□□ 0.31
SS18-224ENST00000584083 APOL3O95236 402 aa17■□□□□ 0.31
SS18-224ENST00000584083 ALPLP05186 524 aa17■□□□□ 0.31
SS18-224ENST00000584083 ATP6V1B1P15313 513 aa17■□□□□ 0.31
SS18-224ENST00000584083 EGR3Q06889 387 aa17■□□□□ 0.31
SS18-224ENST00000584083 MICBQ29980 383 aa17■□□□□ 0.31
SS18-224ENST00000584083 BCL2L15Q5TBC7 163 aa17■□□□□ 0.31
SS18-224ENST00000584083 USP43Q70EL4 1123 aa17■□□□□ 0.31
SS18-224ENST00000584083 SEMA6DQ8NFY4 1073 aa17■□□□□ 0.31
SS18-224ENST00000584083 RPL3LQ92901 407 aaKnown RBP17■□□□□ 0.31
SS18-224ENST00000584083 RFKQ969G6 155 aa17■□□□□ 0.31
SS18-224ENST00000584083 ITFG2Q969R8 447 aa17■□□□□ 0.31
SS18-224ENST00000584083 EME1Q96AY2 570 aa17■□□□□ 0.31
SS18-224ENST00000584083 JMJD8Q96S16 334 aa17■□□□□ 0.31
SS18-224ENST00000584083 RASSF4Q9H2L5 321 aa17■□□□□ 0.31
SS18-224ENST00000584083 R4GMQ9 66 aa17■□□□□ 0.31
SS18-224ENST00000584083 STAB1Q9NY15 2570 aa17■□□□□ 0.31
SS18-224ENST00000584083 TNFRSF13BO14836 293 aaPredicted RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 ENSAO43768 121 aaKnown RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 TTRP02766 147 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 KRT8P05787 483 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 OR2T7P0C7T2 308 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 MUC1P15941 1255 aaPredicted RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 HILS1P60008 231 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 GMFBP60983 142 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 RIPPLY1Q0D2K3 151 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 ZIK1Q3SY52 487 aaPredicted RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 KLF17Q5JT82 389 aaPredicted RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 TEX36Q5VZQ5 186 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 CD276Q5ZPR3 534 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 PLEKHG7Q6ZR37 379 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 OR10H4Q8NGA5 316 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 OR2T27Q8NH04 317 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 HPSE2Q8WWQ2 592 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 TLNRD1Q9H1K6 362 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 MOB1AQ9H8S9 216 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 USE1Q9NZ43 259 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 ZNF69Q9UC07 566 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 MRM2Q9UI43 246 aaKnown RBP16.99■□□□□ 0.31
SS18-224ENST00000584083 OR52A1Q9UKL2 312 aa16.99■□□□□ 0.31
SS18-224ENST00000584083 TMPRSS2O15393 492 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 SRSF10O75494 262 aaKnown RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 MTRF1O75570 445 aaKnown RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 RPP14O95059 124 aaKnown RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 CFHR2P36980 270 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 ALDH3A2P51648 485 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 GPM6AP51674 278 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 CEP78Q5JTW2 689 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 RBMS3Q6XE24 437 aaKnown RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 MOB3CQ70IA8 216 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 SSX6Q7RTT6 188 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 CBR4Q8N4T8 237 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 YIPF7Q8N8F6 280 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 SCCPDHQ8NBX0 429 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 UBE2FQ969M7 185 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 DACT3Q96B18 629 aaPredicted RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 FGF23Q9GZV9 251 aaPredicted RBP16.98■□□□□ 0.31
SS18-224ENST00000584083 SMURF1Q9HCE7 757 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 PIGLQ9Y2B2 252 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 SNX5Q9Y5X3 404 aa16.98■□□□□ 0.31
SS18-224ENST00000584083 IGHV3OR16-10A0A075B7F0 116 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 A0A1W2PQL4 384 aaPredicted RBP16.97■□□□□ 0.31
SS18-224ENST00000584083 ZNF732B4DXR9 585 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 C22orf46C9J442 243 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 TRIM77I1YAP6 450 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 IGLV3-1P01715 115 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 PPIAL4GP0DN37 164 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 FAHP16930 419 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 GNG3P63215 75 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 TMED1Q13445 227 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 CEACAM21Q3KPI0 293 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 ELMOD2Q8IZ81 293 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 ZFAND2BQ8WV99 257 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 TRUB1Q8WWH5 349 aaKnown RBP16.97■□□□□ 0.31
SS18-224ENST00000584083 UPRTQ96BW1 309 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 SEH1LQ96EE3 360 aa16.97■□□□□ 0.31
SS18-224ENST00000584083 CCL13Q99616 98 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms