RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	C2orf72	A6NCS6	295 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LMX1B	O60663	402 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ALOX12B	O75342	701 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GLCE	O94923	617 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ERVS71-1	P61550	626 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RPL18	Q07020	188 aa	Known RBP	10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CLEC18B	Q6UXF7	455 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	DPY19L2P2	Q6ZN68	376 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF615	Q8N8J6	731 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CLEC18C	Q8NCF0	446 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FGF21	Q9NSA1	209 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CUTC	Q9NTM9	273 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	C14orf105	Q9NVL8	296 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF337	Q9Y3M9	751 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	UBE2QL1	A1L167	161 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR2M5	A3KFT3	312 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	C19orf67	A6NJJ6	358 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063		K7EQM0	130 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SERPINA5	P05154	406 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF141	Q15928	474 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SLC22A6	Q4U2R8	563 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MEST	Q5EB52	335 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RGS7BP	Q6MZT1	257 aa	Predicted RBP	10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LRRTM1	Q86UE6	522 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	COMMD1	Q8N668	190 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR51A2	Q8NGJ7	313 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR2G2	Q8NGZ5	317 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR1L3	Q8NH93	324 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SLC2A12	Q8TD20	617 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	HOXB13	Q92826	284 aa	Predicted RBP	10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MIB2	Q96AX9	1013 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF75A	Q96N20	296 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	WDR13	Q9H1Z4	485 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GPN1	Q9HCN4	374 aa	Predicted RBP	10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	DKKL1	Q9UK85	242 aa		10.31	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GDF9	O60383	454 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GLS	O94925	669 aa	Predicted RBP	10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SCGB1D1	O95968	90 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SPARC	P09486	303 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SPOCK1	Q08629	439 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SHB	Q15464	509 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	WDR38	Q5JTN6	314 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PMS2CL	Q68D20	193 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GSG1L	Q6UXU4	331 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GALNT16	Q8N428	558 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR2AK2	Q8NG84	335 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CMBL	Q96DG6	245 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ADAT1	Q9BUB4	502 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ELOVL3	Q9HB03	270 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CUL9	Q8IWT3	2517 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TRAV25	A0A0B4J276	109 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063		F5H5P2	479 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF749	O43361	778 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TGOLN2	O43493	480 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	NBEAP1	P0C6P0	100 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SERTAD2	Q14140	314 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TAF13	Q15543	124 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR2V1	Q8NHB1	315 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TSPAN32	Q96QS1	320 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RAB1B	Q9H0U4	201 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TMEM185B	Q9H7F4	350 aa		10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MRTO4	Q9UKD2	239 aa	Known RBP	10.3	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CXorf65	A6NEN9	183 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	CTDSPL	O15194	276 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FADS1	O60427	444 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ICOSLG	O75144	302 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	HIST1H2AB	P04908	130 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GIP	P09681	153 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	KCNJ3	P48549	501 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GPR143	P51810	404 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RAP2B	P61225	183 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OXLD1	Q5BKU9	147 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PHF19	Q5T6S3	580 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	HIST3H2A	Q7L7L0	130 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF550	Q7Z398	422 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM71C	Q8NEG0	241 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PTPMT1	Q8WUK0	201 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	HIST1H2AC	Q93077	130 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	TAAR8	Q969N4	342 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	NMNAT2	Q9BZQ4	307 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	EXOSC3	Q9NQT5	275 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	FAM86C1	Q9NVL1	165 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	B9D1	Q9UPM9	204 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	KCNIP3	Q9Y2W7	256 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MAP1B	P46821	2468 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	IGHV3-20	A0A0C4DH32	117 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LOC101059948	A0A1B0GTJ6	334 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GGT3P	A6NGU5	568 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	OR4C45	A6NMZ5	311 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	PRAF2	O60831	178 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	LCAT	P04180	440 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	GABRA1	P14867	456 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	UCP2	P55851	309 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	RAG2	P55895	527 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	MFGE8	Q08431	387 aa	Predicted RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	SNTB1	Q13884	538 aa	Known RBP	10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	NSDHL	Q15738	373 aa		10.29	□□□□□ -0.76
CDK5RAP3-231	ENST00000584063	ZNF74	Q16587	644 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms