RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 RBFOX1Q9NWB1 397 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 METTL1Q9UBP6 276 aaKnown RBP3.93□□□□□ -1.78
SS18-223ENST00000583595 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 V9GYH0 126 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 LTN1O94822 1766 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 SCN5AQ14524 2016 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 ASTN1O14525 1302 aa3.93□□□□□ -1.78
SS18-223ENST00000583595 DOT1LQ8TEK3 1739 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 hCG_1818297A0A087WSY0 165 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 BCLAF3A2AJT9 711 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 SERPINE3A8MV23 424 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 INMT-MINDY4F8WBC2 141 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 M0QYV0 167 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 UPK1AO00322 258 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 RRP8O43159 456 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 CHP2O43745 196 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 GPX5O75715 221 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 CBR3O75828 277 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 MPC2O95563 127 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 FADS2O95864 444 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 CSF3P09919 207 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 OR4E1P0C645 316 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 LINC00614P0C842 121 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 UBCP0CG48 685 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 SLC2A1P11166 492 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 ADRB3P13945 408 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 MUC1P15941 1255 aaPredicted RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 HTR1EP28566 365 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 PRDX3P30048 256 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 TGFBR1P36897 503 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 CEACAM6P40199 344 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 LEPP41159 167 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 TMEM50BP56557 158 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 RAB2AP61019 212 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 NUTF2P61970 127 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 IL5RAQ01344 420 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 DEFA5Q01523 94 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 DGCR6Q14129 220 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 ABRAXAS2Q15018 415 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 IRF4Q15306 451 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 SF3A2Q15428 464 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 TAF1AQ15573 450 aaPredicted RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 MOGAT2Q3SYC2 334 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 LGALSLQ3ZCW2 172 aaPredicted RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 PTPN20Q4JDL3 420 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 GPRC6AQ5T6X5 926 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 MEDAGQ5VYS4 303 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 SAXO2Q658L1 398 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 FAM131AQ6UXB0 335 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 C18orf65Q6ZTR6 163 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 COPS6Q7L5N1 327 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 SLC16A14Q7RTX9 510 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 NAXDQ8IW45 347 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 PDZD9Q8IXQ8 264 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 MCOLN2Q8IZK6 566 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 SPAG16Q8N0X2 631 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 ZNF561Q8N587 486 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 ARRDC1Q8N5I2 433 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 C19orf18Q8NEA5 215 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 OR5K1Q8NHB7 308 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 OR10J5Q8NHC4 309 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 ZPLD1Q8TCW7 415 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 UCN3Q969E3 161 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 TMBIM1Q969X1 311 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 C8orf44Q96CB5 159 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 FAM122AQ96E09 287 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 TCEAL4Q96EI5 215 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 CERS2Q96G23 380 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 C9orf85Q96MD7 179 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 HCAR1Q9BXC0 346 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 CHIAQ9BZP6 476 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 RBKSQ9H477 322 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 EXOSC3Q9NQT5 275 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 PNO1Q9NRX1 252 aaKnown RBP3.92□□□□□ -1.78
SS18-223ENST00000583595 MUTYHQ9UIF7 546 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 NUBP2Q9Y5Y2 271 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 TJP1Q07157 1748 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 TOGARAM1Q9Y4F4 1720 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 PTPRJQ12913 1337 aa3.92□□□□□ -1.78
SS18-223ENST00000583595 DOCK2Q92608 1830 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 IGHV4-30-2A0A087WSY4 118 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 NSG1A0A0A6YYJ2 146 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 LOC100131303A0A0U1RQF7 123 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 A0A1B0GUH1 482 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 C7orf66A4D0T2 115 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 C1orf196B1AJZ1 125 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 NME4O00746 187 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 PPP1R2P9O14990 202 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 UBDO15205 165 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 TOX3O15405 576 aaPredicted RBP3.91□□□□□ -1.78
SS18-223ENST00000583595 PLA2G10O15496 165 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 MED6O75586 246 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 ZFAND5O76080 213 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 ATG12O94817 140 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 SCELO95171 688 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 CFDP00746 253 aaPredicted RBP3.91□□□□□ -1.78
SS18-223ENST00000583595 IGLV2-11P01706 119 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 CRHP06850 196 aa3.91□□□□□ -1.78
SS18-223ENST00000583595 SERPINE2P07093 398 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms