RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DEGS2Q6QHC5 323 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 MRPL21Q7Z2W9 205 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 APCDD1LQ8NCL9 501 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 KIAA1143Q96AT1 154 aaPredicted RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 ISG20Q96AZ6 181 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 ZNF707Q96C28 371 aaPredicted RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 UBE2E2Q96LR5 201 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 CSNK1G1Q9HCP0 422 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 RPRD1BQ9NQG5 326 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 DYRK4Q9NR20 520 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 TMEM100Q9NV29 134 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 ZMAT5Q9UDW3 170 aaKnown RBP2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 SHANK1Q9Y566 2161 aa2.92□□□□□ -1.94
SMARCE1-219ENST00000583294 SVILO95425 2214 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 H3BN98 237 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 NTF3P20783 257 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 TAS2R43P59537 309 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 LCN2P80188 198 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 DOC2AQ14183 400 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 HADHQ16836 314 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 TPRG1LQ5T0D9 272 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 MFSD14CQ5VZR4 134 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 LINC00336Q6ZUF6 198 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 WDR31Q8NA23 367 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 OR2Z1Q8NG97 314 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 OR4M2Q8NGB6 313 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 PHF10Q8WUB8 498 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 RDH12Q96NR8 316 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 SFXN3Q9BWM7 321 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 NCOR1P1Q9H4R4 102 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 CRLF2Q9HC73 371 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 TREX1Q9NSU2 369 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 DHCR7Q9UBM7 475 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 CES1P1Q9UKY3 287 aa2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 NDRG2Q9UN36 371 aaKnown RBP2.91□□□□□ -1.94
SMARCE1-219ENST00000583294 PLEKHG2Q9H7P9 1386 aa2.9□□□□□ -1.94
SMARCE1-219ENST00000583294 IGHV3OR16-8A0A075B7F1 116 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 A0A0B4J2E0 115 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 GOLGA6L7A0A1B0GV03 622 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 GOLGA8JA6NMD2 632 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 LINC01619G3V211 115 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 CNMDO75829 334 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 GOLGA8HP0CJ92 632 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 GFAPP14136 432 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 CLDN6P56747 220 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 DAOAP59103 153 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 RBX1P62877 108 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 SPAG1Q07617 926 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 KLHL40Q2TBA0 621 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 MED27Q6P2C8 311 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 PRSS54Q6PEW0 395 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 ULK3Q6PHR2 472 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 NDUFAF7Q7L592 441 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 FAM19A4Q96LR4 140 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 HEBP1Q9NRV9 189 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 OR51B2Q9Y5P1 312 aa2.9□□□□□ -1.95
SMARCE1-219ENST00000583294 CCL15-CCL14A0A0B4J2E2 113 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 LOC100653049A0A140TA62 436 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 ISPDA4D126 451 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 ZNF233A6NK53 670 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 TRDMT1O14717 391 aaKnown RBP2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 PSPHP1O15172 72 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 SCO1O75880 301 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 KRT34O76011 436 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 LHBP01229 141 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 PEX19P40855 299 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 ELF3P78545 371 aaPredicted RBP2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 INCA1Q0VD86 236 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 CCL15Q16663 113 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 STEAP4Q687X5 459 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 CASP12Q6UXS9 341 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 OR5M1Q8NGP8 315 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 OR1P1Q8NH06 330 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 TCP10LQ8TDR4 215 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 S100PBPQ96BU1 408 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 ALS2CR12Q96Q35 445 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 TMEM175Q9BSA9 504 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 RGCCQ9H4X1 137 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 CYP3A43Q9HB55 503 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 PEF1Q9UBV8 284 aaKnown RBP2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 TRIP11Q15643 1979 aa2.89□□□□□ -1.95
SMARCE1-219ENST00000583294 CENPBD1B2RD01 187 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 MYL12BO14950 172 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 CCDC22O60826 627 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 CXCR1P25024 350 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 ARL2P36404 184 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 PPP1CAP62136 330 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 SPINT4Q6UDR6 99 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 OR5T3Q8NGG3 340 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 BAALCQ8WXS3 180 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 Q96MT0 163 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 GABRG3Q99928 467 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 FRMD8P1Q9BZ68 369 aaPredicted RBP2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 PLEKHF2Q9H8W4 249 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 LINC00574Q9H8X3 128 aa2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 ZNF608Q9ULD9 1512 aaPredicted RBP2.88□□□□□ -1.95
SMARCE1-219ENST00000583294 SEC16AO15027 2179 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 C16orf90A8MZG2 172 aa2.87□□□□□ -1.95
SMARCE1-219ENST00000583294 MFNGO00587 321 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms