RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OR4D6Q8NGJ1 314 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 ZNF420Q8TAQ5 688 aaPredicted RBP1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 NRGNQ92686 78 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 TEAD3Q99594 435 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 ZNF649Q9BS31 505 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 UCK2Q9BZX2 261 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 SLC7A5P2Q9GIP4 190 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 OR2S2Q9NQN1 319 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 UBN2Q6ZU65 1347 aa1.05□□□□□ -2.24
SMCHD1-206ENST00000581631 CCNB2O95067 398 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 IGHMP01871 453 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 IGKV1-16P04430 117 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 CLTAP09496 248 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 OR5AC1P0C628 307 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 IFI30P13284 250 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 RFC3P40938 356 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 BEX3Q00994 111 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 KDM4DQ6B0I6 523 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 PDPNQ86YL7 162 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 OR56A4Q8NGH8 313 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 OR8K3Q8NH51 312 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 RASD2Q96D21 266 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 TPD52L3Q96J77 140 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 SFXN3Q9BWM7 321 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 INIPQ9NRY2 104 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 RCL1Q9Y2P8 373 aaKnown RBP1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 CAB39Q9Y376 341 aaPredicted RBP1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 NINLQ9Y2I6 1382 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 SORL1Q92673 2214 aa1.04□□□□□ -2.24
SMCHD1-206ENST00000581631 TSPAN11A1L157 253 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 SYNGR2O43760 224 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ZNF73O43830 326 aaPredicted RBP1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ERLIN1O75477 346 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 PTMSP20962 102 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 IL3RAP26951 378 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ZNF181Q2M3W8 571 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 TRMT5Q32P41 509 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 HSDL1Q3SXM5 330 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 CCDC183Q5T5S1 534 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ARMC12Q5T9G4 340 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 HHATQ5VTY9 493 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 TAS2R42Q7RTR8 314 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 LRRC8AQ8IWT6 810 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ZFP62Q8NB50 900 aaPredicted RBP1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 OR52E5Q8NH55 327 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 RAB1CQ92928 201 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 YIPF5Q969M3 257 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 YIPF6Q96EC8 236 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ALS2CR12Q96Q35 445 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 SND1-IT1Q9HBX3 110 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 ZNF160Q9HCG1 818 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 STX18Q9P2W9 335 aaKnown RBP1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 CES1P1Q9UKY3 287 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 INSRP06213 1382 aa1.03□□□□□ -2.24
SMCHD1-206ENST00000581631 PRR14LQ5THK1 2151 aa1.03□□□□□ -2.25
SMCHD1-206ENST00000581631 SYNJ2BP-COX16A0A087WUM0 186 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 PSPHP1O15172 72 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 CIB2O75838 187 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 OR2F2O95006 317 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 FARS2O95363 451 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 LCA5LO95447 670 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 CTSGP08311 255 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 PRPS1L1P21108 318 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 OTX1P32242 354 aaPredicted RBP1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 OR1G1P47890 313 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 UQCRFS1P47985 274 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 FOXA1P55317 472 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 RPS15AP62244 130 aaKnown RBP1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 IRF8Q02556 426 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 KDSRQ06136 332 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 TSC22D1Q15714 1073 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 METAP1DQ6UB28 335 aaPredicted RBP1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 TMPPEQ6ZT21 453 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 SSH2Q76I76 1423 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 VKORC1L1Q8N0U8 176 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 CCDC77Q9BR77 488 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 CALN1Q9BXU9 219 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 TBL1XR1Q9BZK7 514 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 TMEM185BQ9H7F4 350 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 RABL2BQ9UNT1 228 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 ZNF257Q9Y2Q1 563 aa1.02□□□□□ -2.25
SMCHD1-206ENST00000581631 MROH7Q68CQ1 1323 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 IGKV1OR2-108A0A075B7D4 117 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 TMEM72A0PK05 275 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 H3BQ85 93 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 WBP4O75554 376 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 PRB1P04280 392 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RAB5AP20339 215 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 CALRP27797 417 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 PRSS3P35030 304 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 SLC1A2P43004 574 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RGS6P49758 472 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RPS15P62841 145 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 ATP5G2Q06055 141 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 ITIH4Q14624 930 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 OR1Q1Q15612 314 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 GABRA6Q16445 453 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 HADHQ16836 314 aaKnown RBP1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 KLHL40Q2TBA0 621 aa1.01□□□□□ -2.25
SMCHD1-206ENST00000581631 RAB43Q86YS6 212 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms