RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 PERPQ96FX8 193 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 DERL3Q96Q80 235 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 FOXC2Q99958 501 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 VRK1Q99986 396 aaPredicted RBP13.24□□□□□ -0.29
SS18-216ENST00000580751 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
SS18-216ENST00000580751 SLITRK2Q9H156 845 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 ZNF275Q9NSD4 429 aaPredicted RBP13.24□□□□□ -0.29
SS18-216ENST00000580751 CKLFQ9UBR5 152 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 FOXJ3Q9UPW0 622 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 CREBBPQ92793 2442 aa13.24□□□□□ -0.29
SS18-216ENST00000580751 C5orf63A6NC05 138 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 GGT3PA6NGU5 568 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 C17orf100A8MU93 164 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 IQCF6A8MYZ5 107 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 DHRS3O75911 302 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 ALX3O95076 343 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 NAT2P11245 290 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 FSTP19883 344 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 DDOSTP39656 456 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 ZNF81P51508 661 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 VBP1P61758 197 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 NCS1P62166 190 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 PCGF3Q3KNV8 242 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 ALKBH6Q3KRA9 238 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 TMEM255AQ5JRV8 349 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 KRT74Q7RTS7 529 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 OR51E1Q8TCB6 317 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 TSEN15Q8WW01 171 aaKnown RBP13.23□□□□□ -0.29
SS18-216ENST00000580751 TMEM106AQ96A25 262 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 OR14A2Q96R54 314 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 DIRC2Q96SL1 478 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 DCSTAMPQ9H295 470 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 SNTG1Q9NSN8 517 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 PTTG2Q9NZH5 202 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 ZNF319Q9P2F9 582 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 ZDHHC8Q9ULC8 765 aa13.23□□□□□ -0.29
SS18-216ENST00000580751 OTOGQ6ZRI0 2925 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 hCG_38984A0A1B0GV85 526 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 MEGF11A6BM72 1044 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 P2RY10O00398 339 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 PDCD5O14737 125 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 EFNA4P52798 201 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 ART1P52961 327 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 CNPY1Q3B7I2 92 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 LINC00299Q6ZSB3 139 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 COMMD2Q86X83 199 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 RDH10Q8IZV5 341 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 FTMTQ8N4E7 242 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 BHLHE23Q8NDY6 225 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 OR8G5Q8NG78 346 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 OR13C3Q8NGS6 347 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 NEU4Q8WWR8 484 aaPredicted RBP13.22□□□□□ -0.29
SS18-216ENST00000580751 PP6455Q8WZ26 134 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 PPP1R14AQ96A00 147 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 SORCS2Q96PQ0 1159 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 TPK1Q9H3S4 243 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 CCDC59Q9P031 241 aaKnown RBP13.22□□□□□ -0.29
SS18-216ENST00000580751 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 V9GYS6 101 aa13.22□□□□□ -0.29
SS18-216ENST00000580751 ANKRD61A6NGH8 418 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 IGHV4-39P01824 125 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 ADH4P08319 380 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 SRMP19623 302 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 CALRP27797 417 aaKnown RBP13.21□□□□□ -0.29
SS18-216ENST00000580751 SOX6P35712 828 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 MAP2K3P46734 347 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 SERPINB10P48595 397 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 PRSS12P56730 875 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 LSM3P62310 102 aaKnown RBP13.21□□□□□ -0.29
SS18-216ENST00000580751 FAM3AP98173 230 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 RIPPLY1Q0D2K3 151 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 SPCS2Q15005 226 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 OR8B8Q15620 311 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 FAM209AQ5JX71 171 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 CDH26Q8IXH8 852 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 OR5AS1Q8N127 324 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 ZCCHC24Q8N2G6 241 aaKnown RBP13.21□□□□□ -0.29
SS18-216ENST00000580751 OR56B2PQ8NGI1 322 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 OR5D14Q8NGL3 314 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 OR14K1Q8NGZ2 314 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 TECTBQ96PL2 329 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 SLC22A4Q9H015 551 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 CXXC4Q9H2H0 198 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 NEK6Q9HC98 313 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 MSL2Q9HCI7 577 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 TCF7L1Q9HCS4 588 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 NOX4Q9NPH5 578 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
SS18-216ENST00000580751 MRPL15Q9P015 296 aaKnown RBP13.21□□□□□ -0.29
SS18-216ENST00000580751 NOP16Q9Y3C1 178 aaKnown RBP13.21□□□□□ -0.29
SS18-216ENST00000580751 PIN1P1O15428 100 aa13.2□□□□□ -0.3
SS18-216ENST00000580751 SPRY3O43610 288 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms