RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 SERPINF1P36955 418 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 STARP49675 285 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 BRICD5Q6PL45 260 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 FOXRED2Q8IWF2 684 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 OR6K3Q8NGY3 331 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 SVIPQ8NHG7 77 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 PHB2Q99623 299 aa9.22□□□□□ -0.93
TOP3A-209ENST00000580095 HDHD3Q9BSH5 251 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 COL5A1P20908 1838 aaPredicted RBP9.22□□□□□ -0.93
TOP3A-209ENST00000580095 A0A0A6YYH2 397 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 A6NJ64 397 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 NPIPB13A6NJU9 1138 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 NPIPB4C9JG80 1138 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 F5H0A9 414 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 MELTFP08582 738 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 HIST1H1DP16402 221 aaKnown RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 CSNK1A1P48729 337 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 CHAF1BQ13112 559 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 UBE2V2Q15819 145 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 MRPL14Q6P1L8 145 aaKnown RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 ZNF529Q6P280 563 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 DMRTC2Q8IXT2 367 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM156Q8N614 296 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 RNF138Q8WVD3 245 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 WNT2BQ93097 391 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 TNFSF18Q9UNG2 199 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 ADAMTS20P59510 1910 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 CFAP47Q6ZTR5 3102 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 KANTRA0A1W2PQU2 76 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 ETV2O00321 342 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 TOX3O15405 576 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 ANGPTL7O43827 346 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 DKK1O94907 266 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 FCGR2AP12318 317 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 GLRA1P23415 457 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 HOXA6P31267 233 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 KISS1Q15726 138 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 RSPO1Q2MKA7 263 aaPredicted RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 SLC25A53Q5H9E4 307 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 NKAPLQ5M9Q1 402 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 YRDCQ86U90 279 aaKnown RBP9.21□□□□□ -0.93
TOP3A-209ENST00000580095 TMEM200AQ86VY9 491 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 STX12Q86Y82 276 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 BVESQ8NE79 360 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 ELP5Q8TE02 316 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 MITD1Q8WV92 249 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 PTX4Q96A99 478 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 DUSP23Q9BVJ7 150 aa9.21□□□□□ -0.93
TOP3A-209ENST00000580095 PQLC2LA1A4F0 135 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 KNG1P01042 644 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 CD8AP01732 235 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 PGAM2P15259 253 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 AMY2BP19961 511 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 GABRR1P24046 479 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 PTAFRP25105 342 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 BLVRBP30043 206 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-209ENST00000580095 NTF4P34130 210 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 GUCA1AP43080 201 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-209ENST00000580095 SNAI3Q3KNW1 292 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 CDCP2Q5VXM1 449 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 NAXDQ8IW45 347 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 C5orf66Q9H5L9 145 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 ZNF701Q9NV72 531 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-209ENST00000580095 PLEK2Q9NYT0 353 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 C19orf25Q9UFG5 118 aaPredicted RBP9.21□□□□□ -0.94
TOP3A-209ENST00000580095 CSAG2Q9Y5P2 127 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 HS3ST3B1Q9Y662 390 aa9.21□□□□□ -0.94
TOP3A-209ENST00000580095 IGKV1D-8A0A087WSZ0 117 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 NPIPA2E9PIF3 369 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 NPIPA3F8WFD2 350 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 TP53I11O14683 189 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 ZIC3O60481 467 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 KLF7O75840 302 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-209ENST00000580095 HPP00738 406 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 IGHV3-9P01782 118 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 PDCD1Q15116 288 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 C6orf201Q7Z4U5 140 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 C20orf196Q8IYI0 205 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 FADS6Q8N9I5 356 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 PXT1Q8NFP0 134 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 OR14K1Q8NGZ2 314 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 TERB2Q8NHR7 220 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 KCNG3Q8TAE7 436 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 EDARADDQ8WWZ3 215 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 TMEM230Q96A57 120 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 CLDN23Q96B33 292 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 RRNAD1Q96FB5 475 aaKnown RBP9.2□□□□□ -0.94
TOP3A-209ENST00000580095 PROK2Q9HC23 129 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 TAS2R3Q9NYW6 316 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 GSKIPQ9P0R6 139 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 DKKL1Q9UK85 242 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 PIGLQ9Y2B2 252 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 B3GALT1Q9Y5Z6 326 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 SESN1Q9Y6P5 492 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 IGLV3-32A0A0A0MS00 114 aa9.2□□□□□ -0.94
TOP3A-209ENST00000580095 IGHV1-45A0A0A0MS14 117 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms