RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 C8orf82Q6P1X6 216 aaPredicted RBP10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HACD2Q6Y1H2 254 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR52J3Q8NH60 311 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ZNF649Q9BS31 505 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC22A4Q9H015 551 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SNTG1Q9NSN8 517 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ZNF391Q9UJN7 358 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TCF19Q9Y242 345 aa10.61□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HERC2O95714 4834 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 IGLV1-36A0A0B4J1U3 117 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TRBV4-1A0A0J9YWV2 114 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 A6NDX4 124 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 H0YHG0 523 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DCTN6O00399 190 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DIRAS1O95057 198 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 HLA-DQA2P01906 255 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ACSM4P0C7M7 580 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 AMY2BP19961 511 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PAICSP22234 425 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 COX7A1P24310 79 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC6A6P31641 620 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GGT2P36268 569 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TGM4P49221 684 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RFX4Q33E94 735 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 GLYATQ6IB77 296 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 CFAP77Q6ZQR2 320 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 LINC00346Q8IVM7 164 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MKXQ8IYA7 352 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR6V1Q8N148 313 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR5D13Q8NGL4 314 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR4K13Q8NH42 304 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 FANK1Q8TC84 345 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RCHY1Q96PM5 261 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NMNAT3Q96T66 252 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ATF6BQ99941 703 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ELL3Q9HB65 397 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ABCB10Q9NRK6 738 aa10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 NKX1-2Q9UD57 310 aaPredicted RBP10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ZMAT5Q9UDW3 170 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SAMD4AQ9UPU9 718 aaKnown RBP10.6□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ALDOBP05062 364 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SMIM11AP58511 58 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 PSME3P61289 254 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 TRAP1Q12931 704 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC18B1Q6NT16 456 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KRT77Q7Z794 578 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 FAM185AQ8N0U4 392 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC26A10Q8NG04 563 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 C7orf34Q96L11 122 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DHRS1Q96LJ7 313 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 MCRIP2Q9BUT9 160 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 IFT27Q9BW83 186 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 OR52D1Q9H346 318 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 RPRD1BQ9NQG5 326 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 DCAF13Q9NV06 445 aaKnown RBP10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 C14orf119Q9NWQ9 140 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 SLC25A10Q9UBX3 287 aaPredicted RBP10.59□□□□□ -0.71
CDK5RAP3-213ENST00000579605 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ARPC3O15145 178 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GLCEO94923 617 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GADD45GO95257 159 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 HIST1H1CP16403 213 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 NOS3P29474 1203 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 GRK5P34947 590 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 IFNGR2P38484 337 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 TPTEP56180 551 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CSNK2BP67870 215 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 IL5RAQ01344 420 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SPIBQ01892 262 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNF92Q03936 586 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 DGUOKQ16854 277 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 KCTD18Q6PI47 426 aaPredicted RBP10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 DPY19L4Q7Z388 723 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 C11orf53Q8IXP5 236 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR2AE1Q8NHA4 323 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 FUZQ9BT04 418 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 NSRP1Q9H0G5 558 aaKnown RBP10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 PITPNC1Q9UKF7 332 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 V9GYQ6 96 aa10.58□□□□□ -0.72
CDK5RAP3-213ENST00000579605 NKX6-3A6NJ46 265 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 BHLHE40O14503 412 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZNF823P16415 610 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ETV3LQ6ZN32 361 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 ZBTB46Q86UZ6 589 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 FAM86B1Q8N7N1 296 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR4X2Q8NGF9 303 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 OR8S1Q8NH09 359 aa10.57□□□□□ -0.72
CDK5RAP3-213ENST00000579605 SPTSSAQ969W0 71 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms