RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 TMEM165Q9HC07 324 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 MIOXQ9UGB7 285 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 OR5V1Q9UGF6 321 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 ENPP5Q9UJA9 477 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 SLC22A13Q9Y226 551 aa16.34■□□□□ 0.21
SS18-209ENST00000578595 A0A1B0GVI7 797 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 SRSF10O75494 262 aaKnown RBP16.33■□□□□ 0.2
SS18-209ENST00000578595 CST4P01036 141 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 ATP6V1B1P15313 513 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 PSMB10P40306 273 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 ZNF154Q13106 437 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 KCNJ8Q15842 424 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 SLC25A30Q5SVS4 291 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 WDR86Q86TI4 376 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 ELMOD2Q8IZ81 293 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 NEIL1Q96FI4 390 aaPredicted RBP16.33■□□□□ 0.2
SS18-209ENST00000578595 RDH12Q96NR8 316 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 SSBP3Q9BWW4 388 aaPredicted RBP16.33■□□□□ 0.2
SS18-209ENST00000578595 AMBNQ9NP70 447 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 G6PC2Q9NQR9 355 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 ACOXLQ9NUZ1 547 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 LRCH1Q9Y2L9 728 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 PCDHGB1Q9Y5G3 927 aa16.33■□□□□ 0.2
SS18-209ENST00000578595 IGHV3OR15-7A0A075B7D8 119 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 KIAA1324LA8MWY0 1029 aaPredicted RBP16.32■□□□□ 0.2
SS18-209ENST00000578595 LGALS8O00214 317 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 CDIPTO14735 213 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 SULT1C4O75897 302 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 DHRS3O75911 302 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 PTBP3O95758 552 aaKnown RBP16.32■□□□□ 0.2
SS18-209ENST00000578595 DBTP11182 482 aaKnown RBP16.32■□□□□ 0.2
SS18-209ENST00000578595 THBS2P35442 1172 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 PITPNBP48739 271 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 GPM6AP51674 278 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 ZNF85Q03923 595 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 DCDC5Q6ZRR9 648 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 OR5P3Q8WZ94 311 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 MRPL48Q96GC5 212 aaKnown RBP16.32■□□□□ 0.2
SS18-209ENST00000578595 TECTBQ96PL2 329 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 ATRQ13535 2644 aa16.32■□□□□ 0.2
SS18-209ENST00000578595 TRAV38-1A0A0B4J264 116 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 OOEPA6NGQ2 149 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 TMEM210A6NLX4 147 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 F5H0A9 414 aaPredicted RBP16.31■□□□□ 0.2
SS18-209ENST00000578595 EGR1P18146 543 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 ZFP36P26651 326 aaKnown RBP16.31■□□□□ 0.2
SS18-209ENST00000578595 ZNF684Q5T5D7 378 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 LYPD2Q6UXB3 125 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 DOK3Q7L591 496 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 GCSAMQ8N6F7 178 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 ACBD7Q8N6N7 88 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 RORBQ92753 470 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 RPL3LQ92901 407 aaKnown RBP16.31■□□□□ 0.2
SS18-209ENST00000578595 LGALS12Q96DT0 336 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 VCXQ9H320 206 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 TRIM36Q9NQ86 728 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 C8orf4Q9NR00 106 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 CLN8Q9UBY8 286 aa16.31■□□□□ 0.2
SS18-209ENST00000578595 LOC105371242A0A075B767 164 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 A6NIN4 97 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 ZNF732B4DXR9 585 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 E9PQ18 207 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 J3QLW9 94 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 SLC16A6O15403 523 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 ADAM20O43506 726 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 SYT7O43581 403 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 CLIC3O95833 236 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 GYPAP02724 150 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 WNT2P09544 360 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 ZNF19P17023 458 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 GABRB1P18505 474 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 KRTAP21-3Q3LHN1 58 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 WDR38Q5JTN6 314 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 WDR82Q6UXN9 313 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 CATSPERDQ86XM0 798 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 PACRGLQ8N7B6 248 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 RHOXF1Q8NHV9 184 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 C7orf69Q9H7B7 122 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 RNPEPL1Q9HAU8 725 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 GPR173Q9NS66 373 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 DNAJB11Q9UBS4 358 aa16.3■□□□□ 0.2
SS18-209ENST00000578595 J3QLI3 93 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
SS18-209ENST00000578595 NRASP01111 189 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 IGLV3-1P01715 115 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 HTR1AP08908 422 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 ADRA2CP18825 462 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 GATA3P23771 443 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 ACTA2P62736 377 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 GNG3P63215 75 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 ACTG2P63267 376 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 CEACAM21Q3KPI0 293 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 ZBTB37Q5TC79 503 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 TTC23Q5W5X9 447 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 LHFPL3Q86UP9 236 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 DHRSXQ8N5I4 330 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 TEX29Q8N6K0 151 aa16.29■□□□□ 0.2
SS18-209ENST00000578595 SCCPDHQ8NBX0 429 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms