RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 RHCGQ9UBD6 479 aa11.25□□□□□ -0.61
PPP4R1-206ENST00000577779 CYB5R1Q9UHQ9 305 aa11.25□□□□□ -0.61
PPP4R1-206ENST00000577779 A4GNTQ9UNA3 340 aa11.25□□□□□ -0.61
PPP4R1-206ENST00000577779 LRP12Q9Y561 859 aa11.25□□□□□ -0.61
PPP4R1-206ENST00000577779 N6AMT1Q9Y5N5 214 aa11.25□□□□□ -0.61
PPP4R1-206ENST00000577779 ALMS1Q8TCU4 4167 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 AKR7A2O43488 359 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 LPLP06858 475 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 JUNBP17275 347 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 AZGP1P25311 298 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 CEBPDP49716 269 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 LUMP51884 338 aaPredicted RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 SLC18A1P54219 525 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 WDR4P57081 412 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 EPGNQ6UW88 154 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 DRAM2Q6UX65 266 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 ZNF730Q6ZMV8 503 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 C8orf86Q6ZUL3 223 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 C11orf42Q8N5U0 333 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 CITED4Q96RK1 184 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 TMEM109Q9BVC6 243 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 SRA1Q9HD15 236 aaKnown RBP11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 NRIP3Q9NQ35 241 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 USE1Q9NZ43 259 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 NLKQ9UBE8 527 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 B9D1Q9UPM9 204 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 IER3IP1Q9Y5U9 82 aa11.24□□□□□ -0.61
PPP4R1-206ENST00000577779 NDUFB2O95178 105 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 HLA-DQA2P01906 255 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 MYCNOSP40205 109 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 ECI1P42126 302 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 SLC7A2P52569 658 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 GP2P55259 537 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 OR12D2P58182 307 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 RPL23AP62750 156 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 SLC34A1Q06495 639 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 NFYCQ13952 458 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 TRAM2Q15035 370 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 ABCA11PQ4W5N1 156 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 LDLRAD2Q5SZI1 272 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 TMEM200BQ69YZ2 307 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 TMPRSS11FQ6ZWK6 438 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 RNF113BQ8IZP6 322 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 CAPSLQ8WWF8 208 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 RPL3LQ92901 407 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 MICU1Q9BPX6 476 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 FNDC11Q9BVV2 318 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 NSRP1Q9H0G5 558 aaKnown RBP11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 PPP1R3EQ9H7J1 279 aa11.23□□□□□ -0.61
PPP4R1-206ENST00000577779 IGKV1D-17A0A075B6S4 117 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 NUDT19A8MXV4 375 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 ODF3BA8MYP8 253 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 XRCC2O43543 280 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 IFNA14P01570 189 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 TROVE2P10155 538 aaKnown RBP eCLIP11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 SLC2A1P11166 492 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 CCL3L1P16619 93 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 YAP1P46937 504 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 RAB25P57735 213 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 AGBL2Q5U5Z8 902 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 TBPL2Q6SJ96 375 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 MBOAT2Q6ZWT7 520 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 KRT77Q7Z794 578 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 OFCC1Q8IZS5 231 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 AKR1E2Q96JD6 320 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 GPX7Q96SL4 187 aaPredicted RBP11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 P2RX4Q99571 388 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 PAPOLGQ9BWT3 736 aaKnown RBP11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
PPP4R1-206ENST00000577779 A0A087WUU8 490 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 JTBO76095 146 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 TXNDC12O95881 172 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 PSG2P11465 335 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 GLRA1P23415 457 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 OTX1P32242 354 aaPredicted RBP11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 GZMMP51124 257 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 RPS6KA3P51812 740 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 PRKXP51817 358 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 FAM3AP98173 230 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 DYNC1I2Q13409 638 aaKnown RBP11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 CYBRD1Q53TN4 286 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 C18orf65Q6ZTR6 163 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 SLC16A9Q7RTY1 509 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 OR2W3Q7Z3T1 314 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 OSR2Q8N2R0 312 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 DPP10Q8N608 796 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 OR13D1Q8NGV5 346 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 SPSB4Q96A44 273 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 TPD52L3Q96J77 140 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 RTL8AQ9BWD3 113 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 ZMAT4Q9H898 229 aa11.21□□□□□ -0.61
PPP4R1-206ENST00000577779 ZNF222Q9UK12 451 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms