RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 DUSP13Q9UII6 198 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 PURGQ9UJV8 347 aaKnown RBP20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 PEX16Q9Y5Y5 336 aa20.59■□□□□ 0.89
ATPAF1-213ENST00000574428 ZNF250P15622 560 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 SELEP16581 610 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 S100A5P33763 92 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 PRDX4Q13162 271 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 FTMTQ8N4E7 242 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 OR52N4Q8NGI2 321 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 SYNPRQ8TBG9 265 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 NEUROG1Q92886 237 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 DVL3Q92997 716 aaPredicted RBP20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 SYT3Q9BQG1 590 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 TMEM138Q9NPI0 162 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 RNF115Q9Y4L5 304 aa20.58■□□□□ 0.89
ATPAF1-213ENST00000574428 ANKRD30BLA7E2S9 258 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 IQCF6A8MYZ5 107 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 TIMM8AO60220 97 aaPredicted RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 PLAUP00749 431 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 CST4P01036 141 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 OCMP0CE72 109 aaPredicted RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 ATF1P18846 271 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 KITLGP21583 273 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 LOXP28300 417 aaPredicted RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 PLCXD3Q63HM9 321 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 SFXN4Q6P4A7 337 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 MOB3CQ70IA8 216 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 PIGTQ969N2 578 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 ITFG2Q969R8 447 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 SPACA5Q96QH8 159 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 J3QKU1 62 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 HCKP08631 526 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 CA6P23280 308 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 DDI2Q5TDH0 399 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 TRMT10AQ8TBZ6 339 aaKnown RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 FAM222BQ8WU58 562 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 MYEF2Q9P2K5 600 aaKnown RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 CGGBP1Q9UFW8 167 aaPredicted RBP20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 V9GY05 133 aa20.57■□□□□ 0.88
ATPAF1-213ENST00000574428 NOTOA8MTQ0 251 aa20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 CTDSP2O14595 271 aa20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 SLC2A2P11168 524 aaPredicted RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 AZGP1P25311 298 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 KLF3P57682 345 aaPredicted RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 MEX3BQ6ZN04 569 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 RNF144BQ7Z419 303 aa20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 MRPL37Q9BZE1 423 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 MRPL15Q9P015 296 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 PLEKHB1Q9UF11 243 aaPredicted RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 DAPK2Q9UIK4 370 aa20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 CMAHPQ9Y471 501 aa20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 KLF2Q9Y5W3 355 aaPredicted RBP20.56■□□□□ 0.88
ATPAF1-213ENST00000574428 MEGF11A6BM72 1044 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 IDNKQ5T6J7 187 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 HES5Q5TA89 166 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 KRT74Q7RTS7 529 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 ZDHHC23Q8IYP9 409 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 JAGN1Q8N5M9 183 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 NKAIN3Q8N8D7 197 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 ZNF442Q9H7R0 627 aa20.55■□□□□ 0.88
ATPAF1-213ENST00000574428 PRSS44E7EML9 344 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 ERCC1P07992 297 aaPredicted RBP20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 CNN3Q15417 329 aaKnown RBP20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 MRPL24Q96A35 216 aaKnown RBP20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 FAM230AA0A1W2PPH8 454 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 IFITM5A6NNB3 132 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 E7EQL1 145 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 MAGEB3O15480 346 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 IGHV3-13P01766 116 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 ADIPOQQ15848 244 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 GLT8D1Q68CQ7 371 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 OR8G5Q8NG78 346 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 HPSE2Q8WWQ2 592 aa20.54■□□□□ 0.88
ATPAF1-213ENST00000574428 IGLV3-9A0A075B6K5 115 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 ALX3O95076 343 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 OR4A8P0C604 315 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 PSMD7P51665 324 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 SPSB1Q96BD6 273 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 TMEM204Q9BSN7 226 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 FGF23Q9GZV9 251 aaPredicted RBP20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 MSL2Q9HCI7 577 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 MPC1Q9Y5U8 109 aa20.53■□□□□ 0.88
ATPAF1-213ENST00000574428 A0A0B4J203 849 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 AIPO00170 330 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 PRF1P14222 555 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 ZNF93P35789 620 aaPredicted RBP20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 ETV6P41212 452 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 PPP5CP53041 499 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 CLDN12P56749 244 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 Q6ZR03 302 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 CCDC190Q86UF4 302 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 LYPD6Q86Y78 171 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 LILRB1Q8NHL6 650 aaPredicted RBP20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 GTF3AQ92664 365 aaKnown RBP20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 RFT1Q96AA3 541 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 ITPKCQ96DU7 683 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 TECTBQ96PL2 329 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 METTL17Q9H7H0 456 aaPredicted RBP20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 SLC7A11Q9UPY5 501 aa20.52■□□□□ 0.88
ATPAF1-213ENST00000574428 CLEC18AA5D8T8 446 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms