RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 GCM1Q9NP62 436 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 SCN3BQ9NY72 215 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 ENPP5Q9UJA9 477 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 SLC22A13Q9Y226 551 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 RHBDD3Q9Y3P4 386 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 V9GYS6 101 aa9.32□□□□□ -0.92
CHD3-216ENST00000573936 A0A096LNT2 108 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 A0A1B0GTI1 187 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 P2RY10O00398 339 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 SYT7O43581 403 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PTBP3O95758 552 aaKnown RBP9.31□□□□□ -0.92
CHD3-216ENST00000573936 CCDC159P0C7I6 412 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 CCL1P22362 96 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ACKR3P25106 362 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PSMB10P40306 273 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 CDH15P55291 814 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ST3GAL4Q11206 333 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PRDX4Q13162 271 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ALKBH1Q13686 389 aaKnown RBP9.31□□□□□ -0.92
CHD3-216ENST00000573936 SPRNQ5BIV9 151 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 WDR38Q5JTN6 314 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 RBM48Q5RL73 367 aaKnown RBP9.31□□□□□ -0.92
CHD3-216ENST00000573936 MOGAT3Q86VF5 341 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ZDHHC23Q8IYP9 409 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 Q8TCH9 128 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 TMEM158Q8WZ71 300 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 C10orf35Q96D05 121 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ZNF649Q9BS31 505 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 SOX7Q9BT81 388 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 RTL8AQ9BWD3 113 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 FKBP14Q9NWM8 211 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PAK1IP1Q9NWT1 392 aaPredicted RBP9.31□□□□□ -0.92
CHD3-216ENST00000573936 TREM2Q9NZC2 230 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 FRRS1LQ9P0K9 344 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PSORS1C1Q9UIG5 152 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 PIGLQ9Y2B2 252 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 WIPI2Q9Y4P8 454 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 NPTNQ9Y639 398 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 ABCA1O95477 2261 aa9.31□□□□□ -0.92
CHD3-216ENST00000573936 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 LOC100289279A0A1B0GTE1 492 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 TMEM210A6NLX4 147 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ZNF850A8MQ14 1090 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 TMEM178BH3BS89 294 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 FSTL3O95633 263 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 NRASP01111 189 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ISG15P05161 165 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 GRPP07492 148 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CRHBPP24387 322 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 TGM4P49221 684 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 GZMKP49863 264 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ETV1P50549 477 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 MVKQ03426 396 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ODF4Q2M2E3 257 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 TMEM249Q2WGJ8 235 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CCDC58Q4VC31 144 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CLVS2Q5SYC1 327 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CYB5R2Q6BCY4 276 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 MOB3CQ70IA8 216 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 PRSS35Q8N3Z0 413 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 MAPK1IP1LQ8NDC0 245 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 OR5A2Q8NGI9 324 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 OR14K1Q8NGZ2 314 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 OR52N1Q8NH53 320 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 OR5P3Q8WZ94 311 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 SGCDQ92629 289 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 MYDGFQ969H8 173 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 RNF170Q96K19 258 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 YTHDF1Q9BYJ9 559 aaKnown RBP9.3□□□□□ -0.92
CHD3-216ENST00000573936 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ISG20L2Q9H9L3 353 aaKnown RBP9.3□□□□□ -0.92
CHD3-216ENST00000573936 PLEKHA1Q9HB21 404 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 TPRKBQ9Y3C4 175 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CACNG2Q9Y698 323 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 ANK2Q01484 3957 aa9.3□□□□□ -0.92
CHD3-216ENST00000573936 CHD3Q12873 2000 aaKnown RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 A6NLC8 198 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 TMEM212A6NML5 194 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 SERPINA3P01011 423 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 FAHP16930 419 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 CPT2P23786 658 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 KIR3DL2P43630 455 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 BTG1P62324 171 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 GNG3P63215 75 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 KRTAP1-1Q07627 177 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 TMEM155Q4W5P6 130 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 AVPI1Q5T686 147 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 PRAMEF6Q5VXH4 476 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 RPL22L1Q6P5R6 122 aaKnown RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 KCTD8Q6ZWB6 473 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 AHSA2Q719I0 299 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 MUC20Q8N307 709 aaPredicted RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 OR1M1Q8NGA1 313 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 CLDND2Q8NHS1 167 aa9.29□□□□□ -0.92
CHD3-216ENST00000573936 ZNF420Q8TAQ5 688 aaPredicted RBP9.29□□□□□ -0.92
CHD3-216ENST00000573936 DVL3Q92997 716 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms