RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 ACTA1P68133 377 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 ZNF684Q5T5D7 378 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 DCDC5Q6ZRR9 648 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 FAM220AQ7Z4H9 259 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 C11orf53Q8IXP5 236 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 ITFG2Q969R8 447 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 NEIL1Q96FI4 390 aaPredicted RBP17.3■□□□□ 0.36
CHMP6-204ENST00000572778 GNG8Q9UK08 70 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 PIGLQ9Y2B2 252 aa17.3■□□□□ 0.36
CHMP6-204ENST00000572778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.3■□□□□ 0.369e-7■■■■■ 28.7
CHMP6-204ENST00000572778 SVEP1Q4LDE5 3571 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 LGALS8O00214 317 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 DHRS3O75911 302 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 FAHP16930 419 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 THBS2P35442 1172 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 ZNF91Q05481 1191 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 KCNJ8Q15842 424 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 ODF4Q2M2E3 257 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 CEP78Q5JTW2 689 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 LYPD2Q6UXB3 125 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 MOB3CQ70IA8 216 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 NLRC3Q7RTR2 1065 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 GCSAMQ8N6F7 178 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 OR8B3Q8NGG8 313 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 LRRC29Q8WV35 223 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 RORBQ92753 470 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 LGALS12Q96DT0 336 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 OR8B2Q96RD0 313 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 RNPEPL1Q9HAU8 725 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 AMBNQ9NP70 447 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 ENPP5Q9UJA9 477 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 LRCH1Q9Y2L9 728 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 PCDHGB1Q9Y5G3 927 aa17.29■□□□□ 0.36
CHMP6-204ENST00000572778 TRAV38-1A0A0B4J264 116 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 OOEPA6NGQ2 149 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 TMEM210A6NLX4 147 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 J3QLI3 93 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 DLGAP1O14490 977 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 CDIPTO14735 213 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 GATA3P23771 443 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 CPT2P23786 658 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 PEX2P28328 305 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 PSMB10P40306 273 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 GNB2P62879 340 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 DMRTC1Q5HYR2 192 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 ZBTB37Q5TC79 503 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 WDR82Q6UXN9 313 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 CATSPERDQ86XM0 798 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 ACBD7Q8N6N7 88 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 HPSE2Q8WWQ2 592 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 RPL3LQ92901 407 aaKnown RBP17.28■□□□□ 0.36
CHMP6-204ENST00000572778 SSBP3Q9BWW4 388 aaPredicted RBP17.28■□□□□ 0.36
CHMP6-204ENST00000572778 TMPRSS13Q9BYE2 586 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 FGF23Q9GZV9 251 aaPredicted RBP17.28■□□□□ 0.36
CHMP6-204ENST00000572778 C7orf69Q9H7B7 122 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 C8orf4Q9NR00 106 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 MMP26Q9NRE1 261 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 ACOXLQ9NUZ1 547 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 EXOGQ9Y2C4 368 aaKnown RBP17.28■□□□□ 0.36
CHMP6-204ENST00000572778 JMJD1CQ15652 2540 aa17.28■□□□□ 0.36
CHMP6-204ENST00000572778 A0A1B0GTI1 187 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 A8MXK9 166 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 TRAPPC2LH3BP13 241 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 H3BSH0 61 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 J3QRE1 110 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 AVPP01185 164 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 LHBP01229 141 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 DBTP11182 482 aaKnown RBP17.27■□□□□ 0.36
CHMP6-204ENST00000572778 EGR1P18146 543 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 PITPNBP48739 271 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 GPM6AP51674 278 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 PLCXD3Q63HM9 321 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 DOK3Q7L591 496 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 PACRGLQ8N7B6 248 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 CYGBQ8WWM9 190 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 ADI1Q9BV57 179 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 TRIM36Q9NQ86 728 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 OR5V1Q9UGF6 321 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 V9GYS6 101 aa17.27■□□□□ 0.36
CHMP6-204ENST00000572778 LOC105371242A0A075B767 164 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 IGHV3OR15-7A0A075B7D8 119 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 PPIAL4CA0A0B4J2A2 164 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 A0A1B0GVI7 797 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 ZNF732B4DXR9 585 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 NRASP01111 189 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 OR12D2P58182 307 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 GMFBP60983 142 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 GNG3P63215 75 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 CEACAM21Q3KPI0 293 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 WDR38Q5JTN6 314 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 C1orf229Q6ZS94 237 aaPredicted RBP17.26■□□□□ 0.35
CHMP6-204ENST00000572778 KRT74Q7RTS7 529 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 KCTD20Q7Z5Y7 419 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 SCCPDHQ8NBX0 429 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 OR14K1Q8NGZ2 314 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 TLNRD1Q9H1K6 362 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 CLN8Q9UBY8 286 aa17.26■□□□□ 0.35
CHMP6-204ENST00000572778 POLR3KQ9Y2Y1 108 aaPredicted RBP17.26■□□□□ 0.35
CHMP6-204ENST00000572778 ERICH4A6NGS2 130 aa17.25■□□□□ 0.35
CHMP6-204ENST00000572778 A6NIN4 97 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms